HHsearch alignment for GI: 254780163 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=98.48  E-value=2.2e-05  Score=57.90  Aligned_cols=115  Identities=20%  Similarity=0.365  Sum_probs=82.5

Q ss_pred             EEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf             17774044550289999999987775021779977612542999942421455330368988211148899999872887
Q gi|254780163|r  578 SVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSP  657 (798)
Q Consensus       578 sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~p  657 (798)
T Consensus       293 GVLFIDEvHmLDIE~FsFlnrAlEse-----------~a-PIii~AtNRG~~kiR----GTd~~sP---------hGIP~  347 (450)
T COG1224         293 GVLFIDEVHMLDIECFSFLNRALESE-----------LA-PIIILATNRGMTKIR----GTDIESP---------HGIPL  347 (450)
T ss_pred             CEEEEECHHHHHHHHHHHHHHHHHCC-----------CC-CEEEEECCCCEEEEC----CCCCCCC---------CCCCH
T ss_conf             42897321345578999999876314-----------67-579997177500121----6677688---------88987


Q ss_pred             HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             8817768289628899999999999999999999986698899988999999971898101532679999986235
Q gi|254780163|r  658 EFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVKV  733 (798)
Q Consensus       658 eflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~~  733 (798)
T Consensus       348 DlLDRl-lII~t~py~~~EireIi~iRa~e---------e~i~l~~~Ale~L~~ig~e-----tSLRYa~-qLL~p  407 (450)
T COG1224         348 DLLDRL-LIISTRPYSREEIREIIRIRAKE---------EDIELSDDALEYLTDIGEE-----TSLRYAV-QLLTP  407 (450)
T ss_pred             HHHHHE-EEEECCCCCHHHHHHHHHHHHHH---------HCCCCCHHHHHHHHHHCHH-----HHHHHHH-HHCCH
T ss_conf             666225-67744779889999999976435---------4030488899999751503-----4489999-86168