HHsearch alignment for GI: 254780163 and conserved domain: COG1224
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=98.23 E-value=7.7e-05 Score=53.92 Aligned_cols=44 Identities=41% Similarity=0.671 Sum_probs=35.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCH-HHHEEEEEEEEHHHH
Q ss_conf 748966764116689999999985489883-452014455404675
Q gi|254780163|r 227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPD-ILLGARIFSLDMGNL 271 (798)
Q Consensus 227 n~~lvG~~gvGktaive~la~~i~~~~vp~-~l~~~~i~~ld~~~l 271 (798)
T Consensus 67 giLi~GppgTGKTAlA~gIa~eLG~-dvPF~~isgsEiYS~E~kKT 111 (450)
T COG1224 67 GILIVGPPGTGKTALAMGIARELGE-DVPFVAISGSEIYSLEVKKT 111 (450)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC-CCCCEEECCCEEEEECCCHH
T ss_conf 7999789997688999999998589-99821501332233100088