HHsearch alignment for GI: 254780163 and conserved domain: COG1239
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism].
Probab=97.88 E-value=0.00049 Score=48.13 Aligned_cols=217 Identities=18% Similarity=0.238 Sum_probs=121.8
Q ss_pred CHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEH------------
Q ss_conf 00246653458999999999877520445657874068861432003889999987304773377206------------
Q gi|254780163|r 473 KNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDM------------ 540 (798)
Q Consensus 473 ~~l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dm------------ 540 (798)
T Consensus 13 ~~pf~aivGqd~lk~aL~l~---------av~P~iggvLI~G~kGtaKSt~~Rala~LLp~~~~V~gc~f~cdP~~P~~~ 83 (423)
T COG1239 13 NLPFTAIVGQDPLKLALGLN---------AVDPQIGGALIAGEKGTAKSTLARALADLLPEIEVVIGCPFNCDPDDPEEM 83 (423)
T ss_pred CCCHHHHCCCHHHHHHHHHH---------HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHH
T ss_conf 16656543753777887653---------026310426876688752779999999867963321688788998870555
Q ss_pred HHHHCCC-----------------------CCCHHCCCC-CHHC-CCC----CCCCCCHHHHHCCCEEEEECCHHHCCHH
Q ss_conf 8861246-----------------------530110478-0002-564----4431003555158517774044550289
Q gi|254780163|r 541 SEYMERH-----------------------AVSRLIGAP-PGYV-GFG----QGGILADSVDQNPYSVVLLDEIEKSHPD 591 (798)
Q Consensus 541 sey~e~~-----------------------~vs~LiGap-pGYv-G~~----egg~Lte~vr~~P~sVvl~DEiEKAh~~ 591 (798)
T Consensus 84 c~~c~~k~~e~~~~~~~~r~v~~v~lPl~ateDrvvGslDi~ka~~~g~~af~PGlLa~AnR----GIlYvDEvnlL~d~ 159 (423)
T COG1239 84 CDECRAKGDELEWLPREKRKVPFVALPLGATEDRLVGSLDIEKALEEGPKAFQPGLLARANR----GILYVDEVNLLDDH 159 (423)
T ss_pred HHHHHHHCCCCCCCCCCCEECCEECCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCHHHCCC----CEEEEECCCCCCHH
T ss_conf 19998620232445422100312238876304330045679999726830027751100358----87987233435189
Q ss_pred HHHHHHHHHHHHHCC-CCCCCEECC-CCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEE-EE
Q ss_conf 999999987775021-779977612-542999942421455330368988211148899999872887881776828-96
Q gi|254780163|r 592 VLNILLQIMDYGILT-DQSGKKISF-RNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSI-IP 668 (798)
Q Consensus 592 v~~~llqild~G~lt-d~~Gr~vdf-~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~i-i~ 668 (798)
T Consensus 160 lvd~LLd~aaeG~n~vereGisi~hpa~fvligTmNPEe------------------------GeLrpqLlDRfg~~v~~ 215 (423)
T COG1239 160 LVDALLDVAAEGVNDVEREGISIRHPARFLLIGTMNPEE------------------------GELRPQLLDRFGLEVDT 215 (423)
T ss_pred HHHHHHHHHHHCCCEEEECCEEECCCCCEEEEEECCCCC------------------------CCCCHHHHHHHCCEEEC
T ss_conf 999999999717740335750313676179996448544------------------------66324667541115623
Q ss_pred CCCCCHHHHHHHH-----------------HHHHHHHHHHH-H-HC-CCEEEECHHHHHHHHHCCCCC-CCCCHHHHHH
Q ss_conf 2889999999999-----------------99999999999-8-66-988999889999999718981-0153267999
Q gi|254780163|r 669 FFPLSSDIIRQVV-----------------HKFIMKLELQL-Q-EK-GISFHFSEEVINWLVSHGYDV-KMGARPLERI 726 (798)
Q Consensus 669 F~~l~~~~~~~i~-----------------~~~l~~l~~~l-~-~~-~i~l~~~~~~~~~l~~~~~~~-~~GAR~l~r~ 726 (798)
T Consensus 216 ~~~~~~~~rv~Ii~r~~~f~~~Pe~f~~~~~~~~~~lR~~ii~ar~~l~~V~l~~~~~~~ia~~~~~~~v~g~radi~~ 294 (423)
T COG1239 216 HYPLDLEERVEIIRRRLAFEAVPEAFLEKYADAQRALRARIIAARSLLSEVELDDDAETKIAELCARLAVDGHRADIVV 294 (423)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 4788788889999998875008299999999999999999999984466646767799999999998565787425678