HHsearch alignment for GI: 254780163 and conserved domain: COG1419

>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion].
Probab=96.93  E-value=0.0012  Score=45.37  Aligned_cols=82  Identities=28%  Similarity=0.501  Sum_probs=43.5

Q ss_pred             CCCCEEEEECCCCHHHHH-HHHHHH-HH-----CCCCEEEEE---------HHHHHCCCCCCHHCCCCCHHCCCCCCCCC
Q ss_conf             874068861432003889-999987-30-----477337720---------68861246530110478000256444310
Q gi|254780163|r  505 KPIGCYVFSGPTGVGKTE-ISKQLA-FA-----LGVQLLRFD---------MSEYMERHAVSRLIGAPPGYVGFGQGGIL  568 (798)
Q Consensus       505 rP~g~flf~GptGvGKTe-lak~la-~~-----~~~~lir~d---------msey~e~~~vs~LiGappGYvG~~egg~L  568 (798)
T Consensus       201 ~~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Ya~------im~vp~~vv-~-~~~el  272 (407)
T COG1419         201 EQKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTYAD------IMGVPLEVV-Y-SPKEL  272 (407)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH------HHCCCEEEE-C-CHHHH
T ss_conf             468579998998875887999999999753257606899714411528999999999------869955996-3-99999


Q ss_pred             CHHHHH-CCCEEEEECCHHHCCHHHHH
Q ss_conf             035551-58517774044550289999
Q gi|254780163|r  569 ADSVDQ-NPYSVVLLDEIEKSHPDVLN  594 (798)
Q Consensus       569 te~vr~-~P~sVvl~DEiEKAh~~v~~  594 (798)
T Consensus       273 ~~ai~~l~~~d~ILVDTaGrs~~D~~~  299 (407)
T COG1419         273 AEAIEALRDCDVILVDTAGRSQYDKEK  299 (407)
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf             999998531888999689988337899