HHsearch alignment for GI: 254780163 and conserved domain: COG1484

Probab=97.96  E-value=0.00014  Score=52.07  Aligned_cols=113  Identities=20%  Similarity=0.367  Sum_probs=67.4

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHC---CCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             77874896676411668999999998548988345201445540467530---634312378999999987203898399
Q gi|254780163|r  224 SKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIA---GTRYRGDFEERIKKIVKEIESYANAIL  300 (798)
Q Consensus       224 ~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---g~~~rg~fe~r~~~~~~~~~~~~~~il  300 (798)
T Consensus       104 ~~~nl~l~G~~G~GKthLa~Ai~~~l~~~-------g~sv~f~~~~el~~~Lk~~~~~~~~~~~l~~~l~~~-----dlL  171 (254)
T COG1484         104 RGENLVLLGPPGVGKTHLAIAIGNELLKA-------GISVLFITAPDLLSKLKAAFDEGRLEEKLLRELKKV-----DLL  171 (254)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHC-----CEE
T ss_conf             58828998999987999999999999983-------984999885999999999874552689999887528-----989


Q ss_pred             EECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC
Q ss_conf             973616630155444344777888876630266038873048999998520
Q gi|254780163|r  301 YIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIGSTTYSEYRQFFEK  351 (798)
Q Consensus       301 fideih~ligag~~~g~~~d~an~lkP~L~rg~~~~IgatT~~ey~~~~e~  351 (798)
T Consensus       172 IiDDlG~~~---~~~~~~~~~~q~I~~r~~~~~~~~tsN~~~~~~~~~~~~  219 (254)
T COG1484         172 IIDDIGYEP---FSQEEADLLFQLISRRYESRSLIITSNLSFGEWDELFGD  219 (254)
T ss_pred             EEECCCCCC---CCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCC
T ss_conf             982367766---881558799999999997305420205882788866067