HHsearch alignment for GI: 254780163 and conserved domain: COG1936

>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=95.98  E-value=0.025  Score=35.84  Aligned_cols=151  Identities=15%  Similarity=0.238  Sum_probs=75.3

Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCC
Q ss_conf             88614320038899999873047733772068861246530110478000256444310035551585177740445502
Q gi|254780163|r  510 YVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSH  589 (798)
Q Consensus       510 flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh  589 (798)
T Consensus         3 I~ITGTPGvGKTT~~~~L~-~lg--~~~i~l~el~~e---------~~~~~~~de~---------r~s~~vD~---d~~~   58 (180)
T COG1936           3 IAITGTPGVGKTTVCKLLR-ELG--YKVIELNELAKE---------NGLYTEYDEL---------RKSVIVDV---DKLR   58 (180)
T ss_pred             EEEECCCCCCHHHHHHHHH-HHC--CCEEEHHHHHHH---------CCCEECCCCC---------CCEEEEEH---HHHH
T ss_conf             7993799986687999999-829--846619999986---------6971143776---------61588667---9999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCC-CEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEE
Q ss_conf             899999999877750217799-7761254299994242145533036898821114889999987288788177682896
Q gi|254780163|r  590 PDVLNILLQIMDYGILTDQSG-KKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIP  668 (798)
Q Consensus       590 ~~v~~~llqild~G~ltd~~G-r~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~  668 (798)
T Consensus        59 ~~le~~~---~~~~~Ivd~H~~hl~~~~dlVvVLR~~p~~L~~RLk~RGy~~eKI~ENveAEi~~vi~~EA~E~~~~v~e  135 (180)
T COG1936          59 KRLEELL---REGSGIVDSHLSHLLPDCDLVVVLRADPEVLYERLKGRGYSEEKILENVEAEILDVILIEAVERFEAVIE  135 (180)
T ss_pred             HHHHHHH---CCCCEEEECHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf             8888875---0588476126662178788899971898999999987699878988779999999999999973476499


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q ss_conf             28899999999999999999
Q gi|254780163|r  669 FFPLSSDIIRQVVHKFIMKL  688 (798)
Q Consensus       669 F~~l~~~~~~~i~~~~l~~l  688 (798)
T Consensus       136 vdt-t~~s~ee~~~~i~~ii  154 (180)
T COG1936         136 VDT-TNRSPEEVAEEIIDII  154 (180)
T ss_pred             EEC-CCCCHHHHHHHHHHHH
T ss_conf             978-9999999999999997