HHsearch alignment for GI: 254780163 and conserved domain: COG1936
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=95.98 E-value=0.025 Score=35.84 Aligned_cols=151 Identities=15% Similarity=0.238 Sum_probs=75.3
Q ss_pred EEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCC
Q ss_conf 88614320038899999873047733772068861246530110478000256444310035551585177740445502
Q gi|254780163|r 510 YVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSH 589 (798)
Q Consensus 510 flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh 589 (798)
T Consensus 3 I~ITGTPGvGKTT~~~~L~-~lg--~~~i~l~el~~e---------~~~~~~~de~---------r~s~~vD~---d~~~ 58 (180)
T COG1936 3 IAITGTPGVGKTTVCKLLR-ELG--YKVIELNELAKE---------NGLYTEYDEL---------RKSVIVDV---DKLR 58 (180)
T ss_pred EEEECCCCCCHHHHHHHHH-HHC--CCEEEHHHHHHH---------CCCEECCCCC---------CCEEEEEH---HHHH
T ss_conf 7993799986687999999-829--846619999986---------6971143776---------61588667---9999
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-CEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEE
Q ss_conf 899999999877750217799-7761254299994242145533036898821114889999987288788177682896
Q gi|254780163|r 590 PDVLNILLQIMDYGILTDQSG-KKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIP 668 (798)
Q Consensus 590 ~~v~~~llqild~G~ltd~~G-r~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~ 668 (798)
T Consensus 59 ~~le~~~---~~~~~Ivd~H~~hl~~~~dlVvVLR~~p~~L~~RLk~RGy~~eKI~ENveAEi~~vi~~EA~E~~~~v~e 135 (180)
T COG1936 59 KRLEELL---REGSGIVDSHLSHLLPDCDLVVVLRADPEVLYERLKGRGYSEEKILENVEAEILDVILIEAVERFEAVIE 135 (180)
T ss_pred HHHHHHH---CCCCEEEECHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 8888875---0588476126662178788899971898999999987699878988779999999999999973476499
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q ss_conf 28899999999999999999
Q gi|254780163|r 669 FFPLSSDIIRQVVHKFIMKL 688 (798)
Q Consensus 669 F~~l~~~~~~~i~~~~l~~l 688 (798)
T Consensus 136 vdt-t~~s~ee~~~~i~~ii 154 (180)
T COG1936 136 VDT-TNRSPEEVAEEIIDII 154 (180)
T ss_pred EEC-CCCCHHHHHHHHHHHH
T ss_conf 978-9999999999999997