HHsearch alignment for GI: 254780163 and conserved domain: COG2204
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].
Probab=97.64 E-value=0.00048 Score=48.20 Aligned_cols=148 Identities=22% Similarity=0.377 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCHHHHHHHHHHHHHH----------CCCCCHHHHEEEEEEEEHHH
Q ss_conf 11222178999999998622--6778748966764116689999999985----------48988345201445540467
Q gi|254780163|r 203 VDILVGRHEEINRTIQILCR--RSKNNPLYVGDPGVGKTAIAEGFAKQIV----------DGMVPDILLGARIFSLDMGN 270 (798)
Q Consensus 203 LDPVIGRd~EI~riiqIL~R--R~KNn~~lvG~~gvGktaive~la~~i~----------~~~vp~~l~~~~i~~ld~~~ 270 (798)
T Consensus 140 ~~~liG~S~am~~l~~~i~kvA~s~a~VLI~GESGtGKElvAr~IH~~S~R~~~PFVavNcaAip~~l~ESELFGhekGA 219 (464)
T COG2204 140 GGELVGESPAMQQLRRLIAKVAPSDASVLITGESGTGKELVARAIHQASPRAKGPFIAVNCAAIPENLLESELFGHEKGA 219 (464)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCC
T ss_conf 67752069999999999999847799789977898758999999986074458992563346489888777761456567
Q ss_pred HHC-CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC-------------EEE
Q ss_conf 530-634312378999999987203898399973616630155444344777888876630266-------------038
Q gi|254780163|r 271 LIA-GTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGA-------------VRC 336 (798)
Q Consensus 271 l~a-g~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~-------------~~~ 336 (798)
T Consensus 220 FTGA~~~r~G~fE~-----------A~GGTLfLDEI~~m---------pl~~Q~kLLRvLqe~~~~rvG~~~~i~vdvRi 279 (464)
T COG2204 220 FTGAITRRIGRFEQ-----------ANGGTLFLDEIGEM---------PLELQVKLLRVLQEREFERVGGNKPIKVDVRI 279 (464)
T ss_pred CCCCCCCCCCCEEE-----------CCCCEEEEECCCCC---------CHHHHHHHHHHHHCCEEEECCCCCEECEEEEE
T ss_conf 67764345761577-----------37965873231109---------99999999999870706735888600001699
Q ss_pred EEECCHHHHHHHHHCCH---HHHHHCEEEEECCCCHHH
Q ss_conf 87304899999852011---143200144306878689
Q gi|254780163|r 337 IGSTTYSEYRQFFEKDK---ALVRRFQKIDVSEPSIED 371 (798)
Q Consensus 337 IgatT~~ey~~~~e~d~---al~rrF~~i~v~ep~~~~ 371 (798)
T Consensus 280 IaaT~~d-L~~~v~~G~FReDLyyRLnV~~i~iPpLRE 316 (464)
T COG2204 280 IAATNRD-LEEEVAAGRFREDLYYRLNVVPLRLPPLRE 316 (464)
T ss_pred EEECCCC-HHHHHHCCCCHHHHHHHHCCCEECCCCCCC
T ss_conf 9605778-999988197378888652331104876223