HHsearch alignment for GI: 254780163 and conserved domain: COG5271
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].
Probab=98.75 E-value=5.4e-07 Score=69.42 Aligned_cols=148 Identities=30% Similarity=0.485 Sum_probs=101.5
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCC------CCCCHHHHHCCC
Q ss_conf 78740688614320038899999873047733772068861246530110478000256444------310035551585
Q gi|254780163|r 504 NKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQG------GILADSVDQNPY 577 (798)
Q Consensus 504 ~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~eg------g~Lte~vr~~P~ 577 (798)
T Consensus 888 ~fP---~LiQGpTSSGKTSMI~yla~~tghkfVRINNHEHT---dlqeYiGT---yvTdd~G~lsFkEGvLVeAlR~-Gy 957 (4600)
T COG5271 888 NFP---LLIQGPTSSGKTSMILYLARETGHKFVRINNHEHT---DLQEYIGT---YVTDDDGSLSFKEGVLVEALRR-GY 957 (4600)
T ss_pred CCC---EEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCC---HHHHHHHC---EEECCCCCEEEEHHHHHHHHHC-CC
T ss_conf 786---79866888770049999998737607986585543---49987430---3506898565401078998856-86
Q ss_pred EEEEECCHHHCCHHHHHHHHHHHHHHH---CCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 177740445502899999999877750---21779977612542999942421455330368988211148899999872
Q gi|254780163|r 578 SVVLLDEIEKSHPDVLNILLQIMDYGI---LTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNF 654 (798)
Q Consensus 578 sVvl~DEiEKAh~~v~~~llqild~G~---ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~ 654 (798)
T Consensus 958 W-IVLDELNLApTDVLEaLNRLLDDNRelfIPETqevV~PHp~F~lFATQN--------ppg~YgG-----------RK~ 1017 (4600)
T COG5271 958 W-IVLDELNLAPTDVLEALNRLLDDNRELFIPETQEVVVPHPNFRLFATQN--------PPGGYGG-----------RKG 1017 (4600)
T ss_pred E-EEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCCEEEEEECC--------CCCCCCC-----------HHH
T ss_conf 7-9961024670779999998644664020677552433588736886138--------9865341-----------277
Q ss_pred CCHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 8878817768289628899999999999
Q gi|254780163|r 655 LSPEFLNRLDSIIPFFPLSSDIIRQVVH 682 (798)
Q Consensus 655 f~peflnRid~ii~F~~l~~~~~~~i~~ 682 (798)
T Consensus 1018 LSrAFRNRFlE-~hFddipedEle~ILh 1044 (4600)
T COG5271 1018 LSRAFRNRFLE-MHFDDIPEDELEEILH 1044 (4600)
T ss_pred HHHHHHHHHHH-HHCCCCCHHHHHHHHH
T ss_conf 77999865676-4213585789999996