HHsearch alignment for GI: 254780163 and conserved domain: KOG0478

Probab=97.94  E-value=0.0011  Score=45.76  Aligned_cols=264  Identities=17%  Similarity=0.178  Sum_probs=147.3

Q ss_pred             CHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHH-CCCCCCCCC--CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             11233421000024665345899999999987752-044565787--406886143200388999998730477337720
Q gi|254780163|r  463 DDDSVLSNLEKNLGTVVYGQEEAIKKLSSSIKIAR-AGLSDPNKP--IGCYVFSGPTGVGKTEISKQLAFALGVQLLRFD  539 (798)
Q Consensus       463 ~~~~~l~~l~~~l~~~v~GQ~~ai~~v~~~i~~~~-~gl~~~~rP--~g~flf~GptGvGKTelak~la~~~~~~lir~d  539 (798)
T Consensus       415 krpdiy~lLa~SiAPsIye~edvKkglLLqLfGGt~k~~~~~~~~R~~INILL~GDPGtsKSqlLqyv~~l~pRg~yTSG  494 (804)
T KOG0478         415 KRPDIYELLARSIAPSIYELEDVKKGLLLQLFGGTRKEDEKSGRFRGDINILLVGDPGTSKSQLLQYCHRLLPRGVYTSG  494 (804)
T ss_pred             CCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECC
T ss_conf             28509999988506565344226666778875687632233444245522899469986789999999974775404058


Q ss_pred             HHHHHCCCCCCHHCCCCCHHCCCC-CCCCCC---HHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECC
Q ss_conf             688612465301104780002564-443100---3555158517774044550289999999987775021779977612
Q gi|254780163|r  540 MSEYMERHAVSRLIGAPPGYVGFG-QGGILA---DSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISF  615 (798)
Q Consensus       540 msey~e~~~vs~LiGappGYvG~~-egg~Lt---e~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf  615 (798)
T Consensus       495 -----kGsSavGLT----ayVtrd~dtkqlVLesGALVLSD~GiCCIDEFDKM~dStrSvLhEvMEQQ--------TvSI  557 (804)
T KOG0478         495 -----KGSSAVGLT----AYVTKDPDTRQLVLESGALVLSDNGICCIDEFDKMSDSTRSVLHEVMEQQ--------TLSI  557 (804)
T ss_pred             -----CCCCHHCCE----EEEEECCCCCEEEEECCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHHH--------HHHH
T ss_conf             -----763022003----56776576554665048489728965771123333277889999999876--------3117


Q ss_pred             CCEEEEEECCCCHHHHHHCC-CCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEE-ECCCCCHHHHH----HHHHHH-----
Q ss_conf             54299994242145533036-89882111488999998728878817768289-62889999999----999999-----
Q gi|254780163|r  616 RNVILIMTTNAGALEMSKAR-IGFGSSRNDDADKEALRNFLSPEFLNRLDSII-PFFPLSSDIIR----QVVHKF-----  684 (798)
Q Consensus       616 ~n~iii~TsN~G~~~~~~~~-~g~~~~~~~~~~~~~l~~~f~peflnRid~ii-~F~~l~~~~~~----~i~~~~-----  684 (798)
T Consensus       558 AKAGII~sLNAR~SVLAaANP~~sky-np~k~i~eN--I~LpptLLSRFDLIylllD~~DE~~Dr~La~HivsLy~e~~~  634 (804)
T KOG0478         558 AKAGIIASLNARCSVLAAANPIRSKY-NPNKSIIEN--INLPPTLLSRFDLIFLLLDKPDERSDRRLADHIVALYPETGE  634 (804)
T ss_pred             HHCCEEEECCCCCEEEEEECCCCCCC-CCCCCHHHC--CCCCHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf             43022342166530344535432457-999762321--678805643233789984275326778999999984145552


Q ss_pred             ----------HHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCC-C--CH---HHHHHHHHH--HHHHHHHHHHCCCCCC
Q ss_conf             ----------9999999986698899988999999971898101-5--32---679999986--2359999996296768
Q gi|254780163|r  685 ----------IMKLELQLQEKGISFHFSEEVINWLVSHGYDVKM-G--AR---PLERIIKEH--VKVPLADEILFGKLKK  746 (798)
Q Consensus       685 ----------l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~-G--AR---~l~r~i~~~--i~~~la~~il~~~~~~  746 (798)
T Consensus       635 ~~~~~~~d~~~lr~yi~yArk~i~p~l~~ea~~~l~~ayvd~rk~~~~~~~itat~rQlesLiRlsEahak~r~s~~ve~  714 (804)
T KOG0478         635 KQGSEAIDMNLLRDYIRYARKNIHPALSPEASQALIQAYVDMRKIGEGAGQITATPRQLESLIRLSEAHAKMRLSNRVEE  714 (804)
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             10257786899999999974257865568999999998665665313456530148889999999998887640255544