HHsearch alignment for GI: 254780163 and conserved domain: KOG0480

>KOG0480 consensus.
Probab=95.76  E-value=0.18  Score=29.69  Aligned_cols=228  Identities=17%  Similarity=0.188  Sum_probs=129.6

Q ss_pred             HHHHHHHCCHHHHHHHCHHHHHHHHHHHHHH---HHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHH
Q ss_conf             2334210000246653458999999999877---5204456578740688614320038899999873047733772068
Q gi|254780163|r  465 DSVLSNLEKNLGTVVYGQEEAIKKLSSSIKI---ARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMS  541 (798)
Q Consensus       465 ~~~l~~l~~~l~~~v~GQ~~ai~~v~~~i~~---~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dms  541 (798)
T Consensus       333 ~nly~~lv~Sl~PsIyGhe~VK~GilL~LfGGv~K~a~eg~~lRGDinv~iVGDPgt~KSQfLk~v~~fsPR~vYts---  409 (764)
T KOG0480         333 ENLYKNLVNSLFPSIYGHELVKAGILLSLFGGVHKSAGEGTSLRGDINVCIVGDPGTGKSQFLKAVCAFSPRSVYTS---  409 (764)
T ss_pred             CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEC---
T ss_conf             22899998763762015389986689998478543578986546773189957997138899999865487315850---


Q ss_pred             HHHCCCCCCHHCCCCCHHCCCCCCCCCC-H--HHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCE
Q ss_conf             8612465301104780002564443100-3--555158517774044550289999999987775021779977612542
Q gi|254780163|r  542 EYMERHAVSRLIGAPPGYVGFGQGGILA-D--SVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNV  618 (798)
Q Consensus       542 ey~e~~~vs~LiGappGYvG~~egg~Lt-e--~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~  618 (798)
T Consensus       410 --GkaSSaAGLTaa---VvkD~esgdf~iEAGALmLADnGICCIDEFDKMd~~dqvAihEAMEQ--------QtISIaKA  476 (764)
T KOG0480         410 --GKASSAAGLTAA---VVKDEESGDFTIEAGALMLADNGICCIDEFDKMDVKDQVAIHEAMEQ--------QTISIAKA  476 (764)
T ss_pred             --CCCCCCCCCEEE---EEECCCCCCEEEECCCEEECCCCEEEECHHCCCCHHHHHHHHHHHHH--------HEEHHEEC
T ss_conf             --763443464689---97637777335534737881696688310003570768999999875--------10003302


Q ss_pred             EEEEECCCCHHHHHH-CCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEC-CCCCHHH----HHHHHHHHH-------
Q ss_conf             999942421455330-368988211148899999872887881776828962-8899999----999999999-------
Q gi|254780163|r  619 ILIMTTNAGALEMSK-ARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPF-FPLSSDI----IRQVVHKFI-------  685 (798)
Q Consensus       619 iii~TsN~G~~~~~~-~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F-~~l~~~~----~~~i~~~~l-------  685 (798)
T Consensus       477 Gv~aTLnARtSIlAAANPv~-GhYdR~ktl~eNi--~msApimSRFDL~FiLlD~~nE~~D~~ia~hIld~h~~i~~~~~  553 (764)
T KOG0480         477 GVVATLNARTSILAAANPVG-GHYDRKKTLRENI--NMSAPIMSRFDLFFILLDDCNEVVDYAIARHILDLHRGIDDATE  553 (764)
T ss_pred             CEEEEECCHHHHHHHCCCCC-CCCCCCCCHHHHC--CCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             06886222355555327767-7455330066522--77804542222799993578667779999999987436211023


Q ss_pred             -------HHHHH--HHHHCCCEEEECHHHHHHHHHC
Q ss_conf             -------99999--9986698899988999999971
Q gi|254780163|r  686 -------MKLEL--QLQEKGISFHFSEEVINWLVSH  712 (798)
Q Consensus       686 -------~~l~~--~l~~~~i~l~~~~~~~~~l~~~  712 (798)
T Consensus       554 ~~~~~~~e~vrkYi~yA-R~~~P~ls~ea~~~lve~  588 (764)
T KOG0480         554 RVCVYTLEQVRKYIRYA-RNFKPKLSKEASEMLVEK  588 (764)
T ss_pred             CCCCCCHHHHHHHHHHH-HHCCCCCCHHHHHHHHHH
T ss_conf             25666499999999998-753753248999999999