HHsearch alignment for GI: 254780163 and conserved domain: KOG0651
>KOG0651 consensus.
Probab=97.71 E-value=0.00048 Score=48.22 Aligned_cols=124 Identities=28% Similarity=0.466 Sum_probs=85.8
Q ss_pred HHCHHHHHHHHHHHH--------HHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCC
Q ss_conf 534589999999998--------775204456578740688614320038899999873047733772068861246530
Q gi|254780163|r 479 VYGQEEAIKKLSSSI--------KIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVS 550 (798)
Q Consensus 479 v~GQ~~ai~~v~~~i--------~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs 550 (798)
T Consensus 134 ~ggl~~qirelre~ielpl~np~lf~rvgIk~---Pkg~l-l~GppGtGKTlla~~Vaa~mg~nfl~v~ss~lv~k---- 205 (388)
T KOG0651 134 VGGLFYQIRELREVIELPLTNPELFLRVGIKP---PKGLL-LYGPPGTGKTLLARAVAATMGVNFLKVVSSALVDK---- 205 (388)
T ss_pred HCCHHHHHHHHHHHEEEECCCCHHCCCCCCCC---CCEEE-EECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHH----
T ss_conf 17838888998865574024810023457778---82568-76799986459999999865985477447666330----
Q ss_pred HHCCCCCHHCCCCCCCCCC-----HHHHHCCCEEEEECCHHH-----------CCHHHHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 1104780002564443100-----355515851777404455-----------028999999998777502177997761
Q gi|254780163|r 551 RLIGAPPGYVGFGQGGILA-----DSVDQNPYSVVLLDEIEK-----------SHPDVLNILLQIMDYGILTDQSGKKIS 614 (798)
Q Consensus 551 ~LiGappGYvG~~egg~Lt-----e~vr~~P~sVvl~DEiEK-----------Ah~~v~~~llqild~G~ltd~~Gr~vd 614 (798)
T Consensus 206 --------yiG--EsaRlIRemf~yA~~~~p-ciifmdeiDAigGRr~se~Ts~dreiqrTLMeLlnqmdgfd~l~r--- 271 (388)
T KOG0651 206 --------YIG--ESARLIRDMFRYAREVIP-CIIFMDEIDAIGGRRFSEGTSSDREIQRTLMELLNQMDGFDTLHR--- 271 (388)
T ss_pred --------HCC--CHHHHHHHHHHHHHHHCC-EEEEEHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHCCC---
T ss_conf --------026--578899999977865275-577510123114577335552059999999999874214012066---
Q ss_pred CCCEEEEEECCCC
Q ss_conf 2542999942421
Q gi|254780163|r 615 FRNVILIMTTNAG 627 (798)
Q Consensus 615 f~n~iii~TsN~G 627 (798)
T Consensus 272 ---Vk~ImatNrp 281 (388)
T KOG0651 272 ---VKTIMATNRP 281 (388)
T ss_pred ---CCEEEECCCC
T ss_conf ---3179853886