HHsearch alignment for GI: 254780163 and conserved domain: KOG0652
>KOG0652 consensus.
Probab=98.01 E-value=8.8e-05 Score=53.51 Aligned_cols=156 Identities=26% Similarity=0.351 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHH--HH-----------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHH
Q ss_conf 22178999999998--62-----------267787489667641166899999999854898834520144554046753
Q gi|254780163|r 206 LVGRHEEINRTIQI--LC-----------RRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLI 272 (798)
Q Consensus 206 VIGRd~EI~riiqI--L~-----------RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ 272 (798)
T Consensus 173 iGGldkQIqELvEAiVLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aT--FLKLAgPQLVQ------- 243 (424)
T KOG0652 173 IGGLDKQIQELVEAIVLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNAT--FLKLAGPQLVQ------- 243 (424)
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCH--HHHHCCHHHHH-------
T ss_conf 325789999999886145656878874688899722765799975779999998740106--88732647776-------
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCC-CCCC---------CCHHHHHHHHHCCCCEEEEEECCH
Q ss_conf 063431237899999998720389839997361663015544-4344---------777888876630266038873048
Q gi|254780163|r 273 AGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSA-SGIS---------VDASNLLKPALSSGAVRCIGSTTY 342 (798)
Q Consensus 273 ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~-~g~~---------~d~an~lkP~L~rg~~~~IgatT~ 342 (798)
T Consensus 244 ---MfIGdGAkLVRDAFaLAKEkaP~IIFIDElDAI-GtKRfDSek~GDREVQRTMLELLNQLDGFss~~~vKviAATNR 319 (424)
T KOG0652 244 ---MFIGDGAKLVRDAFALAKEKAPTIIFIDELDAI-GTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNR 319 (424)
T ss_pred ---HHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
T ss_conf ---653341889999998753349838997300232-3343653123438999999999986048997562678852164
Q ss_pred HHHHHHHHCCHHHHH--HC-EEEEECCCCHHHHHHHHHHH
Q ss_conf 999998520111432--00-14430687868999999861
Q gi|254780163|r 343 SEYRQFFEKDKALVR--RF-QKIDVSEPSIEDAIEIVKGI 379 (798)
Q Consensus 343 ~ey~~~~e~d~al~r--rF-~~i~v~ep~~~~~~~iL~~~ 379 (798)
T Consensus 320 vD-----iLDPALlRSGRLDRKIEfP~Pne~aRarIlQIH 354 (424)
T KOG0652 320 VD-----ILDPALLRSGRLDRKIEFPHPNEEARARILQIH 354 (424)
T ss_pred CC-----CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 34-----348888644664444348899778988999886