HHsearch alignment for GI: 254780163 and conserved domain: KOG0652

Probab=97.82  E-value=0.00036  Score=49.11  Aligned_cols=156  Identities=26%  Similarity=0.508  Sum_probs=90.2

Q ss_pred             CHHHHHHHHHHHH--------HHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHH
Q ss_conf             4589999999998--------77520445657874068861432003889999987304773377206886124653011
Q gi|254780163|r  481 GQEEAIKKLSSSI--------KIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRL  552 (798)
Q Consensus       481 GQ~~ai~~v~~~i--------~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~L  552 (798)
T Consensus       175 GldkQIqELvEAiVLpmth~ekF~~lgi~pP---KGvLm-YGPPGTGKTlmARAcAaqT~aTFLKLA-----gPQLVQMf  245 (424)
T KOG0652         175 GLDKQIQELVEAIVLPMTHKEKFENLGIRPP---KGVLM-YGPPGTGKTLMARACAAQTNATFLKLA-----GPQLVQMF  245 (424)
T ss_pred             CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC---CCEEE-ECCCCCCHHHHHHHHHHHCCCHHHHHC-----CHHHHHHH
T ss_conf             5789999999886145656878874688899---72276-579997577999999874010688732-----64777665


Q ss_pred             CCCCCHHCCCCCCCCCC-----HHHHHCCCEEEEECCHHH-----------CCHHHHHHHHHHHH--HHHCCCCCCCEEC
Q ss_conf             04780002564443100-----355515851777404455-----------02899999999877--7502177997761
Q gi|254780163|r  553 IGAPPGYVGFGQGGILA-----DSVDQNPYSVVLLDEIEK-----------SHPDVLNILLQIMD--YGILTDQSGKKIS  614 (798)
Q Consensus       553 iGappGYvG~~egg~Lt-----e~vr~~P~sVvl~DEiEK-----------Ah~~v~~~llqild--~G~ltd~~Gr~vd  614 (798)
T Consensus       246 IG---------dGAkLVRDAFaLAKEkaP-~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQLDGFss~~~-----  310 (424)
T KOG0652         246 IG---------DGAKLVRDAFALAKEKAP-TIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDR-----  310 (424)
T ss_pred             HC---------CHHHHHHHHHHHHHCCCC-EEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-----
T ss_conf             33---------418899999987533498-389973002323343653123438999999999986048997562-----


Q ss_pred             CCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHH--CCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             2542999942421455330368988211148899999872887881--7768289628899999999999999999
Q gi|254780163|r  615 FRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFL--NRLDSIIPFFPLSSDIIRQVVHKFIMKL  688 (798)
Q Consensus       615 f~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~pefl--nRid~ii~F~~l~~~~~~~i~~~~l~~l  688 (798)
T Consensus       311 ---vKviAATNR---------v----------------DiLDPALlRSGRLDRKIEfP~Pne~aRarIlQIHsRKM  358 (424)
T KOG0652         311 ---VKVIAATNR---------V----------------DILDPALLRSGRLDRKIEFPHPNEEARARILQIHSRKM  358 (424)
T ss_pred             ---EEEEEECCC---------C----------------CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             ---678852164---------3----------------43488886446644443488997789889998864005