HHsearch alignment for GI: 254780163 and conserved domain: KOG0727
>KOG0727 consensus.
Probab=98.83 E-value=2e-08 Score=79.70 Aligned_cols=135 Identities=30% Similarity=0.547 Sum_probs=90.3
Q ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHH----HH
Q ss_conf 04456578740688614320038899999873047733772068861246530110478000256444310035----55
Q gi|254780163|r 498 AGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADS----VD 573 (798)
Q Consensus 498 ~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~----vr 573 (798)
T Consensus 184 igidp---prgvlly-gppg~gktml~kava~~t~a~firvvgsefvqk------------ylg--egprmvrdvfrlak 245 (408)
T KOG0727 184 IGIDP---PRGVLLY-GPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK------------YLG--EGPRMVRDVFRLAK 245 (408)
T ss_pred HCCCC---CCCEEEE-CCCCCCHHHHHHHHHHCCCHHEEEECCHHHHHH------------HHC--CCCHHHHHHHHHHH
T ss_conf 08899---8622775-799975789999986126111446301899999------------855--48389999999876
Q ss_pred HCCCEEEEECCHHH-----------CCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCC
Q ss_conf 15851777404455-----------0289999999987775021779977612542999942421455330368988211
Q gi|254780163|r 574 QNPYSVVLLDEIEK-----------SHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSR 642 (798)
Q Consensus 574 ~~P~sVvl~DEiEK-----------Ah~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~ 642 (798)
T Consensus 246 enapsiifideidaiatkrfdaqtgadrevqril~ellnq---mdgfdq~---~nvkvimatnradt------------- 306 (408)
T KOG0727 246 ENAPSIIFIDEIDAIATKRFDAQTGADREVQRILIELLNQ---MDGFDQT---TNVKVIMATNRADT------------- 306 (408)
T ss_pred CCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH---CCCCCCC---CCEEEEEECCCCCC-------------
T ss_conf 1698379862245676641244446318999999999975---1476766---65589983275556-------------
Q ss_pred CHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf 14889999987288788177682896288999999999
Q gi|254780163|r 643 NDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQV 680 (798)
Q Consensus 643 ~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i 680 (798)
T Consensus 307 l----dpa---llrp---grldrkiefp-lpdrrqkrl 333 (408)
T KOG0727 307 L----DPA---LLRP---GRLDRKIEFP-LPDRRQKRL 333 (408)
T ss_pred C----CHH---HCCC---CCCCCCCCCC-CCCHHHHHH
T ss_conf 6----876---6287---6434443577-985466522