HHsearch alignment for GI: 254780163 and conserved domain: KOG0728
>KOG0728 consensus.
Probab=98.52 E-value=8.3e-06 Score=60.88 Aligned_cols=141 Identities=27% Similarity=0.525 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCC----CHHHHHCCCEEE
Q ss_conf 8740688614320038899999873047733772068861246530110478000256444310----035551585177
Q gi|254780163|r 505 KPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGIL----ADSVDQNPYSVV 580 (798)
Q Consensus 505 rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~L----te~vr~~P~sVv 580 (798)
T Consensus 180 QPKGvlLy-gppgtGktLlaraVahht~c~firvsgselvqk------------~ig--egsrmvrelfvmarehapsii 244 (404)
T KOG0728 180 QPKGVLLY-GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK------------YIG--EGSRMVRELFVMAREHAPSII 244 (404)
T ss_pred CCCCEEEE-CCCCCCHHHHHHHHHHHCCEEEEEECHHHHHHH------------HHH--HHHHHHHHHHHHHHHCCCCEE
T ss_conf 87604884-699975629999987541407999644999999------------850--138999999999875088267
Q ss_pred EECCHHH-----------CCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 7404455-----------02899999999877750217799776125429999424214553303689882111488999
Q gi|254780163|r 581 LLDEIEK-----------SHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKE 649 (798)
Q Consensus 581 l~DEiEK-----------Ah~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~ 649 (798)
T Consensus 245 fmdeidsigs~r~e~~~ggdsevqrtmlellnq--l-d--g-featknikvimatnr----i-------------dild~ 301 (404)
T KOG0728 245 FMDEIDSIGSSRVESGSGGDSEVQRTMLELLNQ--L-D--G-FEATKNIKVIMATNR----I-------------DILDP 301 (404)
T ss_pred EEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--C-C--C-CCCCCCEEEEEECCC----C-------------CCCCH
T ss_conf 500001212343457898638999999999974--0-2--4-000366269984164----2-------------22468
Q ss_pred HHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9987288788177682896288999999999999999999
Q gi|254780163|r 650 ALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLE 689 (798)
Q Consensus 650 ~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~ 689 (798)
T Consensus 302 ---allrp---gridrkiefp~p~e~ar~~ilkihsrkmn 335 (404)
T KOG0728 302 ---ALLRP---GRIDRKIEFPPPNEEARLDILKIHSRKMN 335 (404)
T ss_pred ---HHCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf ---66387---75455564899877888789988555301