HHsearch alignment for GI: 254780163 and conserved domain: KOG0744
>KOG0744 consensus.
Probab=97.47 E-value=0.0023 Score=43.29 Aligned_cols=155 Identities=23% Similarity=0.306 Sum_probs=91.4
Q ss_pred HHCCCCCC--------EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCH---HHHHHHHH
Q ss_conf 62267787--------48966764116689999999985489883452014455404675306343123---78999999
Q gi|254780163|r 220 LCRRSKNN--------PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGD---FEERIKKI 288 (798)
Q Consensus 220 L~RR~KNn--------~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~---fe~r~~~~ 288 (798)
T Consensus 164 fsek~vntnlIt~NRliLlhGPPGTGKTSLCKaLaQkLSIR~-~~~y~~~~liEinshsLFS--KWFsESgKlV~kmF~k 240 (423)
T KOG0744 164 FSEKKVNTNLITWNRLILLHGPPGTGKTSLCKALAQKLSIRT-NDRYYKGQLIEINSHSLFS--KWFSESGKLVAKMFQK 240 (423)
T ss_pred HHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHEEEE-CCCCCCCEEEEEEHHHHHH--HHHHHHHHHHHHHHHH
T ss_conf 876178874466414899857999882279999987514652-3764440699970467889--8871211389999999
Q ss_pred HHHHCC-CCC-EEEEECCHHHHHCCC---CCCCCCCC---HHHHHHHHHCC---CCEEEEEECCHHHHHHHHHCCHHHHH
Q ss_conf 987203-898-399973616630155---44434477---78888766302---66038873048999998520111432
Q gi|254780163|r 289 VKEIES-YAN-AILYIDEIHTLVGAG---SASGISVD---ASNLLKPALSS---GAVRCIGSTTYSEYRQFFEKDKALVR 357 (798)
Q Consensus 289 ~~~~~~-~~~-~ilfideih~ligag---~~~g~~~d---~an~lkP~L~r---g~~~~IgatT~~ey~~~~e~d~al~r 357 (798)
T Consensus 241 I~ELv~d~~~lVfvLIDEVESLa~aR~s~~S~~EpsDaIRvVNalLTQlDrlK~~~NvliL~TSNl~----~siD~AfVD 316 (423)
T KOG0744 241 IQELVEDRGNLVFVLIDEVESLAAARTSASSRNEPSDAIRVVNALLTQLDRLKRYPNVLILATSNLT----DSIDVAFVD 316 (423)
T ss_pred HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH----HHHHHHHHH
T ss_conf 9999717896899980787888999875413799821899999999989986047977999626267----777888611
Q ss_pred HCEE-EEECCCCHHHHHHHHHHHHH
Q ss_conf 0014-43068786899999986127
Q gi|254780163|r 358 RFQK-IDVSEPSIEDAIEIVKGIKP 381 (798)
Q Consensus 358 rF~~-i~v~ep~~~~~~~iL~~~~~ 381 (798)
T Consensus 317 RADi~~yVG~Pt~~ai~~Ilkscie 341 (423)
T KOG0744 317 RADIVFYVGPPTAEAIYEILKSCIE 341 (423)
T ss_pred HHHHEEECCCCCHHHHHHHHHHHHH
T ss_conf 7542110389639999999999999