HHsearch alignment for GI: 254780163 and conserved domain: KOG2004
>KOG2004 consensus.
Probab=99.65 E-value=2.5e-14 Score=122.09 Aligned_cols=297 Identities=23% Similarity=0.389 Sum_probs=209.7
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHH
Q ss_conf 98654201555646798899865333321144322113657899986631024531011100112334210000246653
Q gi|254780163|r 401 QLSVRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVY 480 (798)
Q Consensus 401 ~ls~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~ 480 (798)
T Consensus 342 ~~~er~~~-~~~P~~v~kv~~eEl~k--L~~le---~~~sEfnvtrNYLdwlt~LPWgk~S~E-n~dl~~Ak~iLdeDHY 414 (906)
T KOG2004 342 KFRERIKS-LKMPDHVLKVIDEELTK--LKLLE---PSSSEFNVTRNYLDWLTSLPWGKSSTE-NLDLARAKEILDEDHY 414 (906)
T ss_pred HHHHHHHH-CCCCHHHHHHHHHHHHH--HHCCC---CCCCCHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHCCCCC
T ss_conf 99988621-12769999999999998--74257---556404389899999984887878735-3037989876346530
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHH
Q ss_conf 45899999999987752044565-78740688614320038899999873047733772068861246530110478000
Q gi|254780163|r 481 GQEEAIKKLSSSIKIARAGLSDP-NKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGY 559 (798)
Q Consensus 481 GQ~~ai~~v~~~i~~~~~gl~~~-~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGY 559 (798)
T Consensus 415 gm~dVKeRILEfiAV~k--Lrgs~qGk--IlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tD---vAeIkGHRRTY 487 (906)
T KOG2004 415 GMEDVKERILEFIAVGK--LRGSVQGK--ILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTD---VAEIKGHRRTY 487 (906)
T ss_pred CHHHHHHHHHHHHHHHH--HCCCCCCC--EEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC---HHHHCCCCEEE
T ss_conf 16889999999999875--14667883--7998689987732189999998487469985366342---77642542110
Q ss_pred CCCCCCCCCCHHHHH--CCCEEEEECCHHHCC----HHHHHHHHHHHHH---HHCCCCC-CCEECCCCEEEEEECCCCHH
Q ss_conf 256444310035551--585177740445502----8999999998777---5021779-97761254299994242145
Q gi|254780163|r 560 VGFGQGGILADSVDQ--NPYSVVLLDEIEKSH----PDVLNILLQIMDY---GILTDQS-GKKISFRNVILIMTTNAGAL 629 (798)
Q Consensus 560 vG~~egg~Lte~vr~--~P~sVvl~DEiEKAh----~~v~~~llqild~---G~ltd~~-Gr~vdf~n~iii~TsN~G~~ 629 (798)
T Consensus 488 VGAM-PGkiIq~LK~v~t~NPliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~i-- 564 (906)
T KOG2004 488 VGAM-PGKIIQCLKKVKTENPLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVI-- 564 (906)
T ss_pred ECCC-CHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCC--
T ss_conf 0148-8489999986177886588532234178877986899987439653553454202664211106889853644--
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC---EEEECHHHH
Q ss_conf 53303689882111488999998728878817768289628899999999999999999999986698---899988999
Q gi|254780163|r 630 EMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGI---SFHFSEEVI 706 (798)
Q Consensus 630 ~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i---~l~~~~~~~ 706 (798)
T Consensus 565 -----------------------dtIP~pLlDRM-EvIelsGYv~eEKv~IA~~yLip--~a~~~~gl~~e~v~is~~al 618 (906)
T KOG2004 565 -----------------------DTIPPPLLDRM-EVIELSGYVAEEKVKIAERYLIP--QALKDCGLKPEQVKISDDAL 618 (906)
T ss_pred -----------------------CCCCHHHHHHH-HEEECCCCCHHHHHHHHHHHHHH--HHHHHCCCCHHHCCCCHHHH
T ss_conf -----------------------56985664122-32203672279899999984125--78987499878658629999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999971898101532679999986235999999629
Q gi|254780163|r 707 NWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFG 742 (798)
Q Consensus 707 ~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~ 742 (798)
T Consensus 619 ~~lI~-~YcrEaGVRnLqk~iekI~-Rk~Al~vv~~ 652 (906)
T KOG2004 619 LALIE-RYCREAGVRNLQKQIEKIC-RKVALKVVEG 652 (906)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 99999-9988876778999999999-9999999986