HHsearch alignment for GI: 254780163 and conserved domain: KOG2004

>KOG2004 consensus.
Probab=99.65  E-value=2.5e-14  Score=122.09  Aligned_cols=297  Identities=23%  Similarity=0.389  Sum_probs=209.7

Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHH
Q ss_conf             98654201555646798899865333321144322113657899986631024531011100112334210000246653
Q gi|254780163|r  401 QLSVRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVY  480 (798)
Q Consensus       401 ~ls~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~  480 (798)
T Consensus       342 ~~~er~~~-~~~P~~v~kv~~eEl~k--L~~le---~~~sEfnvtrNYLdwlt~LPWgk~S~E-n~dl~~Ak~iLdeDHY  414 (906)
T KOG2004         342 KFRERIKS-LKMPDHVLKVIDEELTK--LKLLE---PSSSEFNVTRNYLDWLTSLPWGKSSTE-NLDLARAKEILDEDHY  414 (906)
T ss_pred             HHHHHHHH-CCCCHHHHHHHHHHHHH--HHCCC---CCCCCHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHCCCCC
T ss_conf             99988621-12769999999999998--74257---556404389899999984887878735-3037989876346530


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHH
Q ss_conf             45899999999987752044565-78740688614320038899999873047733772068861246530110478000
Q gi|254780163|r  481 GQEEAIKKLSSSIKIARAGLSDP-NKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGY  559 (798)
Q Consensus       481 GQ~~ai~~v~~~i~~~~~gl~~~-~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGY  559 (798)
T Consensus       415 gm~dVKeRILEfiAV~k--Lrgs~qGk--IlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tD---vAeIkGHRRTY  487 (906)
T KOG2004         415 GMEDVKERILEFIAVGK--LRGSVQGK--ILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTD---VAEIKGHRRTY  487 (906)
T ss_pred             CHHHHHHHHHHHHHHHH--HCCCCCCC--EEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC---HHHHCCCCEEE
T ss_conf             16889999999999875--14667883--7998689987732189999998487469985366342---77642542110


Q ss_pred             CCCCCCCCCCHHHHH--CCCEEEEECCHHHCC----HHHHHHHHHHHHH---HHCCCCC-CCEECCCCEEEEEECCCCHH
Q ss_conf             256444310035551--585177740445502----8999999998777---5021779-97761254299994242145
Q gi|254780163|r  560 VGFGQGGILADSVDQ--NPYSVVLLDEIEKSH----PDVLNILLQIMDY---GILTDQS-GKKISFRNVILIMTTNAGAL  629 (798)
Q Consensus       560 vG~~egg~Lte~vr~--~P~sVvl~DEiEKAh----~~v~~~llqild~---G~ltd~~-Gr~vdf~n~iii~TsN~G~~  629 (798)
T Consensus       488 VGAM-PGkiIq~LK~v~t~NPliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~i--  564 (906)
T KOG2004         488 VGAM-PGKIIQCLKKVKTENPLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVI--  564 (906)
T ss_pred             ECCC-CHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCC--
T ss_conf             0148-8489999986177886588532234178877986899987439653553454202664211106889853644--


Q ss_pred             HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC---EEEECHHHH
Q ss_conf             53303689882111488999998728878817768289628899999999999999999999986698---899988999
Q gi|254780163|r  630 EMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGI---SFHFSEEVI  706 (798)
Q Consensus       630 ~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i---~l~~~~~~~  706 (798)
T Consensus       565 -----------------------dtIP~pLlDRM-EvIelsGYv~eEKv~IA~~yLip--~a~~~~gl~~e~v~is~~al  618 (906)
T KOG2004         565 -----------------------DTIPPPLLDRM-EVIELSGYVAEEKVKIAERYLIP--QALKDCGLKPEQVKISDDAL  618 (906)
T ss_pred             -----------------------CCCCHHHHHHH-HEEECCCCCHHHHHHHHHHHHHH--HHHHHCCCCHHHCCCCHHHH
T ss_conf             -----------------------56985664122-32203672279899999984125--78987499878658629999


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999971898101532679999986235999999629
Q gi|254780163|r  707 NWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFG  742 (798)
Q Consensus       707 ~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~  742 (798)
T Consensus       619 ~~lI~-~YcrEaGVRnLqk~iekI~-Rk~Al~vv~~  652 (906)
T KOG2004         619 LALIE-RYCREAGVRNLQKQIEKIC-RKVALKVVEG  652 (906)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf             99999-9988876778999999999-9999999986