HHsearch alignment for GI: 254780163 and conserved domain: KOG2004

Probab=98.32  E-value=2.3e-05  Score=57.67  Aligned_cols=180  Identities=26%  Similarity=0.462  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHH-CCCCCC-----EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHH--C---C
Q ss_conf             2217899999999862-267787-----489667641166899999999854898834520144554046753--0---6
Q gi|254780163|r  206 LVGRHEEINRTIQILC-RRSKNN-----PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLI--A---G  274 (798)
Q Consensus       206 VIGRd~EI~riiqIL~-RR~KNn-----~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~--a---g  274 (798)
T Consensus       413 HYgm~dVKeRILEfiAV~kLrgs~qGkIlCf~GPPGVGKTSI~kSIA~AL----------nRkFfRfSvGG~tDvAeIkG  482 (906)
T KOG2004         413 HYGMEDVKERILEFIAVGKLRGSVQGKILCFVGPPGVGKTSIAKSIARAL----------NRKFFRFSVGGMTDVAEIKG  482 (906)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHH----------CCCEEEEECCCCCCHHHHCC
T ss_conf             30168899999999998751466788379986899877321899999984----------87469985366342776425


Q ss_pred             --CCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCC------CC---HHHHHHHHHC----CCCEEEEEE
Q ss_conf             --34312378999999987203898399973616630155444344------77---7888876630----266038873
Q gi|254780163|r  275 --TRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGIS------VD---ASNLLKPALS----SGAVRCIGS  339 (798)
Q Consensus       275 --~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~------~d---~an~lkP~L~----rg~~~~Iga  339 (798)
T Consensus       483 HRRTYVGAMPGkiIq~LK~v~t~-NPliLiDEvDKl-G~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFic-  559 (906)
T KOG2004         483 HRRTYVGAMPGKIIQCLKKVKTE-NPLILIDEVDKL-GSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFIC-  559 (906)
T ss_pred             CCEEEECCCCHHHHHHHHHHCCC-CCEEEEEHHHHH-CCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEE-
T ss_conf             42110014884899999861778-865885322341-788779868999874396535534542026642111068898-


Q ss_pred             CCHHHHHHHHHC-CHHHHHHCEEEEECCCCHHHHHHHHHH-HHHHHHHHC-----CCEECCHHHHHHHHHH
Q ss_conf             048999998520-111432001443068786899999986-127665410-----3512111789999986
Q gi|254780163|r  340 TTYSEYRQFFEK-DKALVRRFQKIDVSEPSIEDAIEIVKG-IKPYFEEHH-----QLRYSKEAIRAAVQLS  403 (798)
Q Consensus       340 tT~~ey~~~~e~-d~al~rrF~~i~v~ep~~~~~~~iL~~-~~~~ye~~h-----~v~~~~~al~~av~ls  403 (798)
T Consensus       560 -TAN~----idtIP~pLlDRMEvIelsGYv~eEKv~IA~~yLip~a~~~~gl~~e~v~is~~al~~lI~~Y  625 (906)
T KOG2004         560 -TANV----IDTIPPPLLDRMEVIELSGYVAEEKVKIAERYLIPQALKDCGLKPEQVKISDDALLALIERY  625 (906)
T ss_pred             -ECCC----CCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHH
T ss_conf             -5364----45698566412232203672279899999984125789874998786586299999999999