HHsearch alignment for GI: 254780163 and conserved domain: KOG2028
>KOG2028 consensus.
Probab=99.28 E-value=1.9e-10 Score=94.29 Aligned_cols=397 Identities=20% Similarity=0.268 Sum_probs=201.8
Q ss_pred CCCHHHHHH-------HHHHHHHCCCCHHHHHHHHHHHH--HHHHH-HCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 530356544-------25887754861122217899999--99986-226778748966764116689999999985489
Q gi|254780163|r 184 FPALSAYCV-------DLTEKVKKGKVDILVGRHEEINR--TIQIL-CRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGM 253 (798)
Q Consensus 184 ~~~LdkFg~-------DLTe~AreGKLDPVIGRd~EI~r--iiqIL-~RR~KNn~~lvG~~gvGktaive~la~~i~~~~ 253 (798)
T Consensus 111 ~~~l~~~e~R~~~qh~PLaermRPktL~dyvGQ~hlv~q~gllrs~ieq~~ipSmIlWGppG~GKTtlArlia~ts---k 187 (554)
T KOG2028 111 KRALAAEEIRQMLQHKPLAERMRPKTLDDYVGQSHLVGQDGLLRSLIEQNRIPSMILWGPPGTGKTTLARLIASTS---K 187 (554)
T ss_pred CCHHHHHHHHHHHCCCCHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHC---C
T ss_conf 2112048888775169745541843687750534414832689999870888705886699876588999998605---7
Q ss_pred CCHHHHEEEEEEEEHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 88345201445540467530634-31237899999998720389839997361663015544434477788887663026
Q gi|254780163|r 254 VPDILLGARIFSLDMGNLIAGTR-YRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSG 332 (798)
Q Consensus 254 vp~~l~~~~i~~ld~~~l~ag~~-~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg 332 (798)
T Consensus 188 ~~----SyrfvelSAt--~a~t~dvR~ife~a-q~~~~l--~krkTilFiDEiHRFN---ks---QQD---~fLP~VE~G 249 (554)
T KOG2028 188 KH----SYRFVELSAT--NAKTNDVRDIFEQA-QNEKSL--TKRKTILFIDEIHRFN---KS---QQD---TFLPHVENG 249 (554)
T ss_pred CC----CEEEEEEECC--CCCHHHHHHHHHHH-HHHHHH--HCCEEEEEEHHHHHHH---HH---HHH---CCCCEECCC
T ss_conf 77----4279997414--56618899999998-878765--2440698737765532---32---110---034213067
Q ss_pred CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHH---HH------HCCCEECCHHHHHHHHHH
Q ss_conf 603887304899999852011143200144306878689999998612766---54------103512111789999986
Q gi|254780163|r 333 AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYF---EE------HHQLRYSKEAIRAAVQLS 403 (798)
Q Consensus 333 ~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~y---e~------~h~v~~~~~al~~av~ls 403 (798)
T Consensus 250 ~I~lIGATTENP---SFqln~aLlSRC~VfvLekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~ls 326 (554)
T KOG2028 250 DITLIGATTENP---SFQLNAALLSRCRVFVLEKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLS 326 (554)
T ss_pred CEEEEECCCCCC---CCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 069985366897---60112778731606673368889999999999876321025688999831245688999998704
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHH
Q ss_conf 54201555646798899865333321144322113657899986631024531011100112334210000246653458
Q gi|254780163|r 404 VRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQE 483 (798)
Q Consensus 404 ~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~ 483 (798)
T Consensus 327 dGD------aR~aLN~Lems~~m~~tr~g~~~~~~lSidDvke~lq~s~--~~YDr~G----e~HYntISA~HKSmRG~D 394 (554)
T KOG2028 327 DGD------ARAALNALEMSLSMFCTRSGQSSRVLLSIDDVKEGLQRSH--ILYDRAG----EEHYNTISALHKSMRGSD 394 (554)
T ss_pred CCH------HHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC--CEECCCC----HHHHHHHHHHHHHHCCCC
T ss_conf 731------8888778999999887524776564002888999985312--0004553----057789999987601776
Q ss_pred H--HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH-HHCCC------CEEEEEHHHHHCCCCCCHHCC
Q ss_conf 9--99999999877520445657874068861432003889999987-30477------337720688612465301104
Q gi|254780163|r 484 E--AIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLA-FALGV------QLLRFDMSEYMERHAVSRLIG 554 (798)
Q Consensus 484 ~--ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la-~~~~~------~lir~dmsey~e~~~vs~LiG 554 (798)
T Consensus 395 ~nAslY~LaRM-------LegGEdPL--------------YVARRlvR~ASEDIGlaD~S~L~~Avaa~q----av~~vG 449 (554)
T KOG2028 395 QNASLYWLARM-------LEGGEDPL--------------YVARRLVRFASEDIGLADPSALTQAVAAYQ----AVHFVG 449 (554)
T ss_pred CCHHHHHHHHH-------HCCCCCCH--------------HHHHHHHHHHHCCCCCCCCHHHHHHHHHHH----HHHHHC
T ss_conf 55279999999-------71688707--------------999999987510337678036688999988----888808
Q ss_pred CCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCC--CCEECCCCEEEEEECCCCHHHHH
Q ss_conf 7800025644431003555158517774044550289999999987775021779--97761254299994242145533
Q gi|254780163|r 555 APPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQS--GKKISFRNVILIMTTNAGALEMS 632 (798)
Q Consensus 555 appGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~--Gr~vdf~n~iii~TsN~G~~~~~ 632 (798)
T Consensus 450 mPE~dviL---AqC~v~lA~APKSievYr----a----~~~vka~ls~---~~~~~~~vPlHlRN--------APTkLMk 507 (554)
T KOG2028 450 MPECDVIL---AQCVVYLARAPKSIEVYR----A----YNAVKACLSN---HQGPLPEVPLHLRN--------APTKLMK 507 (554)
T ss_pred CCHHHHHH---HHHHHHHHHCCCHHHHHH----H----HHHHHHHHHC---CCCCCCCCCCHHHC--------CCHHHHH
T ss_conf 93588899---999999984863039999----9----9999999743---25788888730302--------7378999
Q ss_pred HCCCCCCCCC---CHHHHHHHHHHHCCHHHHCCCCE
Q ss_conf 0368988211---14889999987288788177682
Q gi|254780163|r 633 KARIGFGSSR---NDDADKEALRNFLSPEFLNRLDS 665 (798)
Q Consensus 633 ~~~~g~~~~~---~~~~~~~~l~~~f~peflnRid~ 665 (798)
T Consensus 508 e--LGY~KgYkYnPdy~~g~v~Qeylp~ell~~~~~ 541 (554)
T KOG2028 508 E--LGYGKGYKYNPDYISGPVDQEYLPEELLEKCPN 541 (554)
T ss_pred H--HCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCC
T ss_conf 8--376877557986655522044456999863655