HHsearch alignment for GI: 254780163 and conserved domain: PRK00131
>PRK00131 aroK shikimate kinase; Reviewed.
Probab=97.91 E-value=0.00075 Score=46.81 Aligned_cols=158 Identities=18% Similarity=0.292 Sum_probs=75.0
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC--CHHHHEEEEEEEEHHHHHCCCCCCCH--HHHHHHHHHHHHCCCCCE
Q ss_conf 67787489667641166899999999854898--83452014455404675306343123--789999999872038983
Q gi|254780163|r 223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMV--PDILLGARIFSLDMGNLIAGTRYRGD--FEERIKKIVKEIESYANA 298 (798)
Q Consensus 223 R~KNn~~lvG~~gvGktaive~la~~i~~~~v--p~~l~~~~i~~ld~~~l~ag~~~rg~--fe~r~~~~~~~~~~~~~~ 298 (798)
T Consensus 2 ~~~~nI~liG~~GsGKTtvgk~LA~~L~~~fiD~D~~Ie--~~~g~si~~if~~---~Ge~~FR~~E~~~l~~l~~~~~~ 76 (175)
T PRK00131 2 LKGPNIVLIGMMGAGKSTIGRLLAKRLGYEFIDTDHLIE--ARAGKSIPEIFEE---EGEAGFRELEEEVLAELLQRHNL 76 (175)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHH--HHHCCCHHHHHHH---HCHHHHHHHHHHHHHHHCCCCCE
T ss_conf 999808988899999899999999995969023988999--7616999999998---58899999999999965147985
Q ss_pred EEEECCHHHHHCCCCCCCCCC-CHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHH-HH
Q ss_conf 999736166301554443447-7788887663-02660388730489999985201114320014430687868999-99
Q gi|254780163|r 299 ILYIDEIHTLVGAGSASGISV-DASNLLKPAL-SSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAI-EI 375 (798)
Q Consensus 299 ilfideih~ligag~~~g~~~-d~an~lkP~L-~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~-~i 375 (798)
T Consensus 77 VI------------stGGG~v~~~~~~--~~L~~~g~v-V~L~~~~e~l~~Rl~~~~--~R---Pll~-~~~~~~~l~~l 135 (175)
T PRK00131 77 VI------------STGGGAVLREENR--ALLRERGTV-VYLDASFEELLRRLARDR--NR---PLLQ-TEDPKEKLRAL 135 (175)
T ss_pred EE------------ECCCCCCCCHHHH--HHHHCCCCE-EEEECCHHHHHHHHCCCC--CC---CCCC-CCCHHHHHHHH
T ss_conf 99------------7489822688999--999816937-998579999999864899--99---8788-99869999999
Q ss_pred HHHHHHHHHHHCCCEE--CC----HHHHHHHHHHHHH
Q ss_conf 9861276654103512--11----1789999986542
Q gi|254780163|r 376 VKGIKPYFEEHHQLRY--SK----EAIRAAVQLSVRH 406 (798)
Q Consensus 376 L~~~~~~ye~~h~v~~--~~----~al~~av~ls~ry 406 (798)
T Consensus 136 ~~~R~~~Y~~~Ad~~Idt~~~s~~ei~~~Ii~~L~~~ 172 (175)
T PRK00131 136 YEERDPLYEEVADLTIETDRRSPEEVVNEILELLELL 172 (175)
T ss_pred HHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 9999998975389999899999999999999999998