HHsearch alignment for GI: 254780163 and conserved domain: PRK03731
>PRK03731 aroL shikimate kinase II; Reviewed.
Probab=97.31 E-value=0.0059 Score=40.37 Aligned_cols=146 Identities=15% Similarity=0.176 Sum_probs=71.5
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCC--CCCHHHHEEEEEEEEHHHHHC--CCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 7874896676411668999999998548--988345201445540467530--634312378999999987203898399
Q gi|254780163|r 225 KNNPLYVGDPGVGKTAIAEGFAKQIVDG--MVPDILLGARIFSLDMGNLIA--GTRYRGDFEERIKKIVKEIESYANAIL 300 (798)
Q Consensus 225 KNn~~lvG~~gvGktaive~la~~i~~~--~vp~~l~~~~i~~ld~~~l~a--g~~~rg~fe~r~~~~~~~~~~~~~~il 300 (798)
T Consensus 2 ~~~I~LiG~mGsGKstiGk~LA~~L~~~fiD~D~~Ie~--~~g~sI~eif~~~Ge~~FR~~E~---~~l~~l~~-~~~-- 73 (172)
T PRK03731 2 TQPLFLVGPRGCGKTTVGMALAQALGYRFVDTDLWLQS--TLQMTVAEIVEREGWAGFRARES---AALEAVTA-PST-- 73 (172)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHH--HHCCCHHHHHHHHCHHHHHHHHH---HHHHHHCC-CCE--
T ss_conf 99889988999988999999999859997978699998--83989999999839899999999---99998427-882--
Q ss_pred EECCHHHHHCCCCCCCCC-CCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHH
Q ss_conf 973616630155444344-77788887663-0266038873048999998520111432001443068786899999986
Q gi|254780163|r 301 YIDEIHTLVGAGSASGIS-VDASNLLKPAL-SSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKG 378 (798)
Q Consensus 301 fideih~ligag~~~g~~-~d~an~lkP~L-~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~ 378 (798)
T Consensus 74 -------VI---stGGG~v~~~~n~--~~L~~~g~vv~L-~~~~~~l~~Rl~~~~~~~--~RPll~~~~~~~~i~~l~~~ 138 (172)
T PRK03731 74 -------VV---ATGGGIILTEENR--AFMRNNGIVIYL-CAPVSVLANRLEADPEED--QRPTLTGKPLSEEVAEVLAE 138 (172)
T ss_pred -------EE---EECCCCCCCHHHH--HHHHHCCEEEEE-ECCHHHHHHHHHCCCCCC--CCCCCCCCCHHHHHHHHHHH
T ss_conf -------89---8078642689999--999968999999-799999999981387789--89878899879999999999
Q ss_pred HHHHHHHHCCCEECC
Q ss_conf 127665410351211
Q gi|254780163|r 379 IKPYFEEHHQLRYSK 393 (798)
Q Consensus 379 ~~~~ye~~h~v~~~~ 393 (798)
T Consensus 139 R~~~Y~~~a~~ii~~ 153 (172)
T PRK03731 139 RDALYREVAHHIIDA 153 (172)
T ss_pred HHHHHHHHCCEEECC
T ss_conf 999999848998879