HHsearch alignment for GI: 254780163 and conserved domain: PRK05201

>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.

Probab=98.40  E-value=7.3e-06  Score=61.30  Aligned_cols=55  Identities=33%  Similarity=0.534  Sum_probs=33.6

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCH-HHHHHHHHH
Q ss_conf             778748966764116689999999985489883452014455404675306343123-789999999
Q gi|254780163|r  224 SKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGD-FEERIKKIV  289 (798)
Q Consensus       224 ~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~-fe~r~~~~~  289 (798)
T Consensus        49 ~pkNILmIGPTGvGKTeIARrLAkl~---~aP-------FvkveATk~-TEvGYvGrDVEsiIrdLv  104 (442)
T PRK05201         49 TPKNILMIGPTGVGKTEIARRLAKLA---NAP-------FIKVEATKF-TEVGYVGRDVESIIRDLV  104 (442)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCC-------EEEEECCCC-CCCCCCCCCHHHHHHHHH
T ss_conf             64316887888866789999999984---898-------587521310-003435643788999999