HHsearch alignment for GI: 254780163 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.30 E-value=7.7e-11 Score=97.05 Aligned_cols=202 Identities=22% Similarity=0.292 Sum_probs=139.1
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHHCCCCCH--HH-----------
Q ss_conf 25887754861122217899999999862267787-48966764116689999999985489883--45-----------
Q gi|254780163|r 193 DLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNN-PLYVGDPGVGKTAIAEGFAKQIVDGMVPD--IL----------- 258 (798)
Q Consensus 193 DLTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn-~~lvG~~gvGktaive~la~~i~~~~vp~--~l----------- 258 (798)
T Consensus 5 alyrKYRPk~F~eIIGQe~iv~~L~nAI~~~RiaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC~~I~~ 84 (613)
T PRK05896 5 TFYRKYRPHNFKQIIGQELIKKILVNAILNNKLTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVCESINT 84 (613)
T ss_pred CHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 12450179976552382999999999998499762277558998488999999999966999999998888878999856
Q ss_pred -HEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCC----CCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--
Q ss_conf -2014455404675306343123789999999872038----983999736166301554443447778888766302--
Q gi|254780163|r 259 -LGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESY----ANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS-- 331 (798)
Q Consensus 259 -~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~----~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r-- 331 (798)
T Consensus 85 g~h~DviEIdaa------sn~g--IDeIReLie~~~~~P~~gkyKV~IIDEah~L---------n~~AaNALLKtLEEPP 147 (613)
T PRK05896 85 NQSVDIVELDAA------SNNG--VDEIRNIIDNINYLPTTFKYKVYIIDEAHML---------STSAWNALLKTLEEPP 147 (613)
T ss_pred CCCCCEEEEECC------CCCC--HHHHHHHHHHHCCCCCCCCCEEEEECCHHHC---------CHHHHHHHHHHCCCCC
T ss_conf 999986884065------5578--8999999997085875799459998162217---------9999999998534898
Q ss_pred CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCC
Q ss_conf 66038873048999998520111432001443068786899999986127665410351211178999998654201555
Q gi|254780163|r 332 GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRK 411 (798)
Q Consensus 332 g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~ 411 (798)
T Consensus 148 ~~viFIL~Ttep~--KL---LpTIlSRCQrf~Fkri~~~~I~~~L~~I~~k----E~i~ie~~AL~~Ia~~adGs~RD-- 216 (613)
T PRK05896 148 KHVVFIFATTEFQ--KI---PLTIISRCQRYNFKKLNNSELQELLKSIAKK----EKIKIEDNAIDKIADLADGSLRD-- 216 (613)
T ss_pred CCCEEEEEECCHH--HC---CHHHHHCCCCEECCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH--
T ss_conf 7837999828815--49---3766403550017889989999999999997----39987899999999976884878--
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 646798899865333
Q gi|254780163|r 412 LPDKAIDVIDEAGAS 426 (798)
Q Consensus 412 lPdkAidllDea~a~ 426 (798)
T Consensus 217 ----AlslLdQ~~~~ 227 (613)
T PRK05896 217 ----GLSILDQLSTF 227 (613)
T ss_pred ----HHHHHHHHHHH
T ss_conf ----98899999983