HHsearch alignment for GI: 254780163 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.80 E-value=1.6e-06 Score=65.93 Aligned_cols=127 Identities=27% Similarity=0.363 Sum_probs=73.8
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC-CCCEEEEEHHHHHCCCCCCH--HC
Q ss_conf 6653458999999999877520445657874068861432003889999987304-77337720688612465301--10
Q gi|254780163|r 477 TVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL-GVQLLRFDMSEYMERHAVSR--LI 553 (798)
Q Consensus 477 ~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~-~~~lir~dmsey~e~~~vs~--Li 553 (798)
T Consensus 16 ~eIIGQe~iv~~L~nAI~~~R--------iaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~d---pCg~C~sC~~I~~ 84 (613)
T PRK05896 16 KQIIGQELIKKILVNAILNNK--------LTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGD---CCNSCSVCESINT 84 (613)
T ss_pred HHHCCCHHHHHHHHHHHHCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC---CCCCCHHHHHHHC
T ss_conf 552382999999999998499--------76227755899848899999999996699999999---8888878999856
Q ss_pred CCCCH--------HCCCCCCCCCCHHHHHCC----CEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
Q ss_conf 47800--------025644431003555158----517774044550289999999987775021779977612542999
Q gi|254780163|r 554 GAPPG--------YVGFGQGGILADSVDQNP----YSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILI 621 (798)
Q Consensus 554 GappG--------YvG~~egg~Lte~vr~~P----~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii 621 (798)
T Consensus 85 g~h~DviEIdaasn~gIDeIReLie~~~~~P~~gkyKV~IIDEah~Ln~~AaNALLKtLEEP-----------P~~viFI 153 (613)
T PRK05896 85 NQSVDIVELDAASNNGVDEIRNIIDNINYLPTTFKYKVYIIDEAHMLSTSAWNALLKTLEEP-----------PKHVVFI 153 (613)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHCCCC-----------CCCCEEE
T ss_conf 99998688406555788999999997085875799459998162217999999999853489-----------8783799
Q ss_pred EECC
Q ss_conf 9424
Q gi|254780163|r 622 MTTN 625 (798)
Q Consensus 622 ~TsN 625 (798)
T Consensus 154 L~Tt 157 (613)
T PRK05896 154 FATT 157 (613)
T ss_pred EEEC
T ss_conf 9828