HHsearch alignment for GI: 254780163 and conserved domain: PRK05917
>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=96.29 E-value=0.11 Score=31.35 Aligned_cols=167 Identities=17% Similarity=0.152 Sum_probs=89.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHE------EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHC----CCCC
Q ss_conf 489667641166899999999854898834520------144554046753063431237899999998720----3898
Q gi|254780163|r 228 PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLG------ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIE----SYAN 297 (798)
Q Consensus 228 ~~lvG~~gvGktaive~la~~i~~~~vp~~l~~------~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~----~~~~ 297 (798)
T Consensus 22 yLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~~HPD~~~i~p----e~k~~~~~I-d~iR~l~~~i~~~p~~g~~ 96 (290)
T PRK05917 22 ILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQKIHPDIHEFFP----EGKGRLHSI-ETPRAIKKQIWIHPYEANY 96 (290)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECC----CCCCCCCCH-HHHHHHHHHHCCCCCCCCC
T ss_conf 87689998659999999999985789961688987468998599615----777887867-8999999996418646882
Q ss_pred EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECC-----CCHH
Q ss_conf 3999736166301554443447778888766302--66038873048999998520111432001443068-----7868
Q gi|254780163|r 298 AILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSE-----PSIE 370 (798)
Q Consensus 298 ~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~e-----p~~~ 370 (798)
T Consensus 97 KV~IId~Ad~M---------n~~AaNALLKtLEEPP~~tvfILit~~~~--~l---LpTI~SRCQ~I~i~~~e~~~i~~e 162 (290)
T PRK05917 97 KIYIIHEADRM---------TLDAISAFLKVLEDPPKHSVIILTSAKPQ--RL---PPTIRSRSLSIHIPGEEKTLPSKE 162 (290)
T ss_pred EEEEECCHHHH---------CHHHHHHHHHHHCCCCCCEEEEEEECCHH--HC---CHHHHHCCCEEECCCCCCCCCCHH
T ss_conf 69997567763---------89999999997347987859999869925--48---237763351167776201347889
Q ss_pred HHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 9999998612766541035121117899999865420155564679889986
Q gi|254780163|r 371 DAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDE 422 (798)
Q Consensus 371 ~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDe 422 (798)
T Consensus 163 ~~~~l~~~a~g~~----~~~~~~~~~k~~~d~~~~~-----~r~k~~~~l~~ 205 (290)
T PRK05917 163 DIAYLIRYAQGKE----SVTEVGQIVKGSADTDKQV-----LRDKTKRMLEV 205 (290)
T ss_pred HHHHHHHHHCCCH----HHHHHHHHHCCHHHHHHHH-----HHHHHHHHHHH
T ss_conf 9999999846973----8889998830127766787-----78999999999