HHsearch alignment for GI: 254780163 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.87 E-value=7.1e-07 Score=68.58 Aligned_cols=128 Identities=23% Similarity=0.304 Sum_probs=81.0
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC-------CCE-----EEEEHHHHH
Q ss_conf 66534589999999998775204456578740688614320038899999873047-------733-----772068861
Q gi|254780163|r 477 TVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALG-------VQL-----LRFDMSEYM 544 (798)
Q Consensus 477 ~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~-------~~l-----ir~dmsey~ 544 (798)
T Consensus 21 ~~liGQ~~~~~~l~n~i~~~~~--------~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~~i~ 92 (507)
T PRK06645 21 AELQGQEVLVKVLSYTILNDRL--------AGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCISFN 92 (507)
T ss_pred HHHCCCHHHHHHHHHHHHCCCC--------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 5623939999999999973996--------63477458799788999999999967999888899888888876789986
Q ss_pred CCCCCCHH--CCCCCHHCCCCCCCCCCHHHHHCC----CEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCE
Q ss_conf 24653011--047800025644431003555158----517774044550289999999987775021779977612542
Q gi|254780163|r 545 ERHAVSRL--IGAPPGYVGFGQGGILADSVDQNP----YSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNV 618 (798)
Q Consensus 545 e~~~vs~L--iGappGYvG~~egg~Lte~vr~~P----~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~ 618 (798)
T Consensus 93 ~~~~~dv~EiDaa--s~~gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEep-----------p~~~ 159 (507)
T PRK06645 93 NHNHPDIIEIDAA--SKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEP-----------PPHI 159 (507)
T ss_pred CCCCCCEEEEECC--CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCC-----------CCCE
T ss_conf 5899985996378--88888999999863551787674358995214224899999999974278-----------6443
Q ss_pred EEEEECC
Q ss_conf 9999424
Q gi|254780163|r 619 ILIMTTN 625 (798)
Q Consensus 619 iii~TsN 625 (798)
T Consensus 160 ~Fi~att 166 (507)
T PRK06645 160 IFIFATT 166 (507)
T ss_pred EEEEECC
T ss_conf 8999748