HHsearch alignment for GI: 254780163 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=96.94 E-value=0.019 Score=36.80 Aligned_cols=133 Identities=23% Similarity=0.374 Sum_probs=73.6
Q ss_pred HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHC---CCCCCCHHHHHHHHHHHHH
Q ss_conf 9998622677874896676411668999999998548988345201445540467530---6343123789999999872
Q gi|254780163|r 216 TIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIA---GTRYRGDFEERIKKIVKEI 292 (798)
Q Consensus 216 iiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---g~~~rg~fe~r~~~~~~~~ 292 (798)
T Consensus 175 fi~~F~~~~-~nLlf~G~~G~GKTfLa~~IA~ell~~-------g~sViy~ta~~L~~~l~~~~~~~~--~~~~~~~~~l 244 (330)
T PRK06835 175 FIKNFDKNN-ENLLFYGNTGTGKTFLSNCIAKELLDR-------GKTVIYRTSDELIENLREIRFNND--NDAPELEDLL 244 (330)
T ss_pred HHHHCCCCC-CCEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEEHHHHHHHHHHHHCCCC--CCHHHHHHHH
T ss_conf 987247888-866988999998899999999999987-------994999629999999999754576--4489999999
Q ss_pred CCCCCEEEEECCHHHHHCCCCCCCCCCCHH---HHHHHHHCCCCEEEEEEC--CHHHHHHHHHCCHHHHHH---CEEEEE
Q ss_conf 038983999736166301554443447778---888766302660388730--489999985201114320---014430
Q gi|254780163|r 293 ESYANAILYIDEIHTLVGAGSASGISVDAS---NLLKPALSSGAVRCIGST--TYSEYRQFFEKDKALVRR---FQKIDV 364 (798)
Q Consensus 293 ~~~~~~ilfideih~ligag~~~g~~~d~a---n~lkP~L~rg~~~~Igat--T~~ey~~~~e~d~al~rr---F~~i~v 364 (798)
T Consensus 245 ~~~-D-LLIIDDL------G~E~~t~~~~~~Lf~iIN~R~~~~-k~tIITTNl~~~eL~~~y~-eRi~SRi~~~~~~~~~ 314 (330)
T PRK06835 245 INC-D-LLIIDDL------GTESITEFSKTELFNLINKRLLMN-KKMIISTNLSLEELLKTYS-ERIASRLLGNFTLLKF 314 (330)
T ss_pred HHC-C-EEEEECC------CCCCCCHHHHHHHHHHHHHHHHCC-CCEEEECCCCHHHHHHHHH-HHHHHHHHHCCEEEEE
T ss_conf 618-9-8997210------345588689999999999998679-9979988999899999874-8999999818549985
Q ss_pred CCCC
Q ss_conf 6878
Q gi|254780163|r 365 SEPS 368 (798)
Q Consensus 365 ~ep~ 368 (798)
T Consensus 315 ~G~D 318 (330)
T PRK06835 315 YGED 318 (330)
T ss_pred ECCC
T ss_conf 2655