HHsearch alignment for GI: 254780163 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.57 E-value=0.0092 Score=39.00 Aligned_cols=109 Identities=19% Similarity=0.264 Sum_probs=65.4
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHC-CCCEEEEEHHHHHCCCCCCHH--CCCCCHHC----------CCCCCCCCCH
Q ss_conf 7874068861432003889999987304-773377206886124653011--04780002----------5644431003
Q gi|254780163|r 504 NKPIGCYVFSGPTGVGKTEISKQLAFAL-GVQLLRFDMSEYMERHAVSRL--IGAPPGYV----------GFGQGGILAD 570 (798)
Q Consensus 504 ~rP~g~flf~GptGvGKTelak~la~~~-~~~lir~dmsey~e~~~vs~L--iGappGYv----------G~~egg~Lte 570 (798)
T Consensus 20 ~r~~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~--~-~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~I~vd~IR~l~~ 96 (324)
T PRK06871 20 GRGHHALLFKADSGLGTEQLIRALAQWLMCQAPG--D-EQPCGQCHSCHLFQAGNHPDFHILEPIDGKDIGVDQVREINE 96 (324)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC--C-CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 9954378768999978999999999998289999--9-998888989999973899987998467888788999999999
Q ss_pred HHHHCCC----EEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCC
Q ss_conf 5551585----1777404455028999999998777502177997761254299994242
Q gi|254780163|r 571 SVDQNPY----SVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNA 626 (798)
Q Consensus 571 ~vr~~P~----sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~ 626 (798)
T Consensus 97 ~~~~~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEPp-----------~~~~fiL~t~~ 145 (324)
T PRK06871 97 KVSQFAQQGGNKVVYIQGAERLTEAAANALLKTLEEPR-----------PNTYFLLQADL 145 (324)
T ss_pred HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC-----------CCEEEEEEECC
T ss_conf 98646220596699975888857999999999833898-----------78389998787