HHsearch alignment for GI: 254780163 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=98.20 E-value=0.00018 Score=51.27 Aligned_cols=193 Identities=20% Similarity=0.214 Sum_probs=114.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEE--------EEEHHHHH
Q ss_conf 611222178999999998622677874-896676411668999999998548988345201445--------54046753
Q gi|254780163|r 202 KVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIF--------SLDMGNLI 272 (798)
Q Consensus 202 KLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~--------~ld~~~l~ 272 (798)
T Consensus 2 ~F~~iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~~i~P~~~~ 81 (314)
T PRK07399 2 LFANLIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLLWVEPTYQH 81 (314)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCC
T ss_conf 83312594999999999998599674487789998329999999999985789999766558751899977886056200
Q ss_pred CCCCCCC-HHH--------------HHHHHHHHHHCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC-CC
Q ss_conf 0634312-378--------------999999987203----898399973616630155444344777888876630-26
Q gi|254780163|r 273 AGTRYRG-DFE--------------ERIKKIVKEIES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALS-SG 332 (798)
Q Consensus 273 ag~~~rg-~fe--------------~r~~~~~~~~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~-rg 332 (798)
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m---------~~~AaNaLLKtLEEP~ 152 (314)
T PRK07399 82 QGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETM---------NEAAANALLKTLEEPG 152 (314)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHC---------CHHHHHHHHHHHCCCC
T ss_conf 3454557789876530268777879999999999731885688479998897871---------9999999998614787
Q ss_pred CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCC
Q ss_conf 60388730489999985201114320014430687868999999861276654103512111789999986542015556
Q gi|254780163|r 333 AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKL 412 (798)
Q Consensus 333 ~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~l 412 (798)
T Consensus 153 ~~~fILit~~~~--~l---LpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~--~--~~~~~~---~~l~~~A~------Gs 214 (314)
T PRK07399 153 NGTLILIAPSPE--SL---LPTIVSRCQIIPFYRLSDEQLEQVLKRLGDN--I--NEILDH---PELLALAQ------GS 214 (314)
T ss_pred CCEEEEEECCHH--HC---CHHHHCCCEEEECCCCCHHHHHHHHHHCCCC--C--CCCCCH---HHHHHHHC------CC
T ss_conf 856999979936--49---1466418756338998999999999971664--3--310278---99998817------99
Q ss_pred HHHHHHHHH
Q ss_conf 467988998
Q gi|254780163|r 413 PDKAIDVID 421 (798)
Q Consensus 413 PdkAidllD 421 (798)
T Consensus 215 pG~a~~~~~ 223 (314)
T PRK07399 215 PGAAIANIE 223 (314)
T ss_pred HHHHHHHHH
T ss_conf 799999999