HHsearch alignment for GI: 254780163 and conserved domain: PRK07471

>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=98.17  E-value=0.00051  Score=48.03  Aligned_cols=191  Identities=16%  Similarity=0.182  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHHHHE-E--EEEEEE----HHHHH-CC-
Q ss_conf             222178999999998622677874-89667641166899999999854898834520-1--445540----46753-06-
Q gi|254780163|r  205 ILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDILLG-A--RIFSLD----MGNLI-AG-  274 (798)
Q Consensus       205 PVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~l~~-~--~i~~ld----~~~l~-ag-  274 (798)
T Consensus        18 ~liGqe~~~~~L~~a~~~grl~HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~~~   97 (363)
T PRK07471         18 ALFGHAAAEAALLDAYRSGRLHHAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAAGA   97 (363)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCC
T ss_conf             31681999999999998599764587679998188999999999985799977777678705312587772899995269


Q ss_pred             ---------------CCCCCHH-HHHHHHHHHHHC----CCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--C
Q ss_conf             ---------------3431237-899999998720----38983999736166301554443447778888766302--6
Q gi|254780163|r  275 ---------------TRYRGDF-EERIKKIVKEIE----SYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS--G  332 (798)
Q Consensus       275 ---------------~~~rg~f-e~r~~~~~~~~~----~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g  332 (798)
T Consensus        98 hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~m---------n~~aaNALLK~LEEPP~  168 (363)
T PRK07471         98 HGGLLTLERSWNEKGKRLRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEM---------NANAANALLKVLEEPPA  168 (363)
T ss_pred             CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHH---------CHHHHHHHHHHHCCCCC
T ss_conf             998466762001133321244539999999999724852489669998687873---------88999999997215898


Q ss_pred             CEEEEEECC-HHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCC
Q ss_conf             603887304-8999998520111432001443068786899999986127665410351211178999998654201555
Q gi|254780163|r  333 AVRCIGSTT-YSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRK  411 (798)
Q Consensus       333 ~~~~IgatT-~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~  411 (798)
T Consensus       169 ~t~fiLit~~~~~l------lpTI~SRCq~~~~~~l~~~~~~~~L~-------~~~~~~~~~~~~~~la~~a~G------  229 (363)
T PRK07471        169 RSLLLLVSHAPARL------LPTIRSRCRKLRLRPLAPEDVIAALA-------EAGGPALDDAELAALAALAEG------  229 (363)
T ss_pred             CEEEEEEECCHHHC------HHHHHHHCCCCCCCCCCHHHHHHHHH-------HHCCCCCCHHHHHHHHHHCCC------
T ss_conf             83899863997777------79999735242589959999999999-------843899998999999997589------


Q ss_pred             CHHHHHHHHHHH
Q ss_conf             646798899865
Q gi|254780163|r  412 LPDKAIDVIDEA  423 (798)
Q Consensus       412 lPdkAidllDea  423 (798)
T Consensus       230 s~~~Al~l~~~~  241 (363)
T PRK07471        230 SVGRALRLAGGD  241 (363)
T ss_pred             CHHHHHHHHCCC
T ss_conf             999999874798