HHsearch alignment for GI: 254780163 and conserved domain: PRK07993

>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=97.46  E-value=0.00043  Score=48.56  Aligned_cols=181  Identities=16%  Similarity=0.207  Sum_probs=103.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH-----
Q ss_conf             530356544258877548611222178999999998622677874896676411668999999998548988345-----
Q gi|254780163|r  184 FPALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDIL-----  258 (798)
Q Consensus       184 ~~~LdkFg~DLTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l-----  258 (798)
T Consensus         4 YPWl~~~~~~l~~~~~~~rl~---------------------HA~L~~G~~G~Gk~~la~~~a~~llC~~-~~~~~~Cg~   61 (334)
T PRK07993          4 YPWLRPDYEKLVGSYQAGRGH---------------------HALLIQALPGMGDDALIYALSRYLLCQQ-PQGHKSCGH   61 (334)
T ss_pred             CCCCHHHHHHHHHHHHCCCCC---------------------EEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCC
T ss_conf             888789999999999859810---------------------4675479999889999999999981899-999999999


Q ss_pred             -H-----------EEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHC----CCCCEEEEECCHHHHHCCCCCCCCCCCHH
Q ss_conf             -2-----------0144554046753063431237899999998720----38983999736166301554443447778
Q gi|254780163|r  259 -L-----------GARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIE----SYANAILYIDEIHTLVGAGSASGISVDAS  322 (798)
Q Consensus       259 -~-----------~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~----~~~~~ilfideih~ligag~~~g~~~d~a  322 (798)
T Consensus        62 C~~C~l~~~~~HPD~~~i~pe~----~~~~I~---IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~m---------n~~Aa  125 (334)
T PRK07993         62 CRGCQLMQAGTHPDYYTLTPEK----GKSSLG---VDAVREVTEKLYEHARLGGAKVVWLPDAALL---------TDAAA  125 (334)
T ss_pred             CHHHHHHHCCCCCCEEEECCCC----CCCCCC---HHHHHHHHHHHHHCCCCCCCEEEEECCHHHH---------CHHHH
T ss_conf             9789998668999847753422----345599---9999999999843665699479997667775---------99999


Q ss_pred             HHHHHHHCC--CCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHH
Q ss_conf             888766302--660388730489999985201114320014430687868999999861276654103512111789999
Q gi|254780163|r  323 NLLKPALSS--GAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAV  400 (798)
Q Consensus       323 n~lkP~L~r--g~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av  400 (798)
T Consensus       126 NaLLKtLEEPp~~t~~iL~t~--~~~~---lLpTI~SRCq~~~~~~~~~~~~~~wL~~~---------~~~~~~~~~~al  191 (334)
T PRK07993        126 NALLKTLEEPPEKTWFFLACR--EPAR---LLATLRSRCRLHYLAPPPEQYALTWLSRE---------VTMSQEALLAAL  191 (334)
T ss_pred             HHHHHHHCCCCCCEEEEEECC--CHHH---CCCHHHHHCCCCCCCCCCHHHHHHHHHHH---------CCCCHHHHHHHH
T ss_conf             999986127998849998669--8565---72388752304158997999999999873---------689889999999


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             9865420155564679889986
Q gi|254780163|r  401 QLSVRHFTSRKLPDKAIDVIDE  422 (798)
Q Consensus       401 ~ls~ryi~~r~lPdkAidllDe  422 (798)
T Consensus       192 ~la~G------spl~A~~l~~~  207 (334)
T PRK07993        192 RLSAG------APGAALALLQP  207 (334)
T ss_pred             HHCCC------CHHHHHHHHCC
T ss_conf             98499------89999998256