HHsearch alignment for GI: 254780163 and conserved domain: PRK08116

>PRK08116 hypothetical protein; Validated.
Probab=98.56  E-value=1.5e-06  Score=66.27  Aligned_cols=165  Identities=21%  Similarity=0.288  Sum_probs=94.8

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEHHHHHCCCCCCHHCCCCC
Q ss_conf             458999999999877520445657874068861432003889999987304---77337720688612465301104780
Q gi|254780163|r  481 GQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---GVQLLRFDMSEYMERHAVSRLIGAPP  557 (798)
Q Consensus       481 GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~---~~~lir~dmsey~e~~~vs~LiGapp  557 (798)
T Consensus        86 ~~~~a~~~a~~Y~~~f~-~~~~--~~~-GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~~ll~~lk~~-------  154 (262)
T PRK08116         86 GSEKAYKVAVKYVKKFE-EMKK--ESV-GLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVPELLNRIKST-------  154 (262)
T ss_pred             CHHHHHHHHHHHHHHHH-HHCC--CCC-EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH-------
T ss_conf             25999999999999898-7364--686-189989899989999999999999879939998899999999999-------


Q ss_pred             HHCCCCCCC-----CCCHHHHHCCCEEEEECCH--HHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHH
Q ss_conf             002564443-----1003555158517774044--550289999999987775021779977612542999942421455
Q gi|254780163|r  558 GYVGFGQGG-----ILADSVDQNPYSVVLLDEI--EKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALE  630 (798)
Q Consensus       558 GYvG~~egg-----~Lte~vr~~P~sVvl~DEi--EKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~  630 (798)
T Consensus       155 ----~~~~~~~~~~e~l~~l~--~~dLLIiDDlG~e~~t~w~~e~lf~IIn~-Ry~~~k---------ptIiTTNl~~~e  218 (262)
T PRK08116        155 ----YNSEGKEDENEIIRALD--NADLLILDDLGAEKDTEWVREKLYNIIDS-RYRKGL---------PTIFTTNLSLEE  218 (262)
T ss_pred             ----HHCCCCHHHHHHHHHHH--CCCEEEEEHHCCCCCCHHHHHHHHHHHHH-HHHCCC---------CEEEECCCCHHH
T ss_conf             ----86356101999999861--29989983221456987899999999999-997699---------989987999999


Q ss_pred             HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHH
Q ss_conf             3303689882111488999998728878817768289628899999999-9999999999999
Q gi|254780163|r  631 MSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQ-VVHKFIMKLELQL  692 (798)
Q Consensus       631 ~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~-i~~~~l~~l~~~l  692 (798)
T Consensus       219 L~~--------------------~~~~Ri~sRl~e~~~~v~~~G~d~R~~~a~~k~~~~~~~l  261 (262)
T PRK08116        219 LKN--------------------QYGKRTYSRILEMCTPVKNEGKSYRREIAKEKLERLKELL  261 (262)
T ss_pred             HHH--------------------HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             999--------------------8637999999867789985177887999999999999860