HHsearch alignment for GI: 254780163 and conserved domain: PRK08116
>PRK08116 hypothetical protein; Validated.
Probab=98.56 E-value=1.5e-06 Score=66.27 Aligned_cols=165 Identities=21% Similarity=0.288 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEHHHHHCCCCCCHHCCCCC
Q ss_conf 458999999999877520445657874068861432003889999987304---77337720688612465301104780
Q gi|254780163|r 481 GQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---GVQLLRFDMSEYMERHAVSRLIGAPP 557 (798)
Q Consensus 481 GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~---~~~lir~dmsey~e~~~vs~LiGapp 557 (798)
T Consensus 86 ~~~~a~~~a~~Y~~~f~-~~~~--~~~-GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~~ll~~lk~~------- 154 (262)
T PRK08116 86 GSEKAYKVAVKYVKKFE-EMKK--ESV-GLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVPELLNRIKST------- 154 (262)
T ss_pred CHHHHHHHHHHHHHHHH-HHCC--CCC-EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH-------
T ss_conf 25999999999999898-7364--686-189989899989999999999999879939998899999999999-------
Q ss_pred HHCCCCCCC-----CCCHHHHHCCCEEEEECCH--HHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHH
Q ss_conf 002564443-----1003555158517774044--550289999999987775021779977612542999942421455
Q gi|254780163|r 558 GYVGFGQGG-----ILADSVDQNPYSVVLLDEI--EKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALE 630 (798)
Q Consensus 558 GYvG~~egg-----~Lte~vr~~P~sVvl~DEi--EKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~ 630 (798)
T Consensus 155 ----~~~~~~~~~~e~l~~l~--~~dLLIiDDlG~e~~t~w~~e~lf~IIn~-Ry~~~k---------ptIiTTNl~~~e 218 (262)
T PRK08116 155 ----YNSEGKEDENEIIRALD--NADLLILDDLGAEKDTEWVREKLYNIIDS-RYRKGL---------PTIFTTNLSLEE 218 (262)
T ss_pred ----HHCCCCHHHHHHHHHHH--CCCEEEEEHHCCCCCCHHHHHHHHHHHHH-HHHCCC---------CEEEECCCCHHH
T ss_conf ----86356101999999861--29989983221456987899999999999-997699---------989987999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHH
Q ss_conf 3303689882111488999998728878817768289628899999999-9999999999999
Q gi|254780163|r 631 MSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQ-VVHKFIMKLELQL 692 (798)
Q Consensus 631 ~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~-i~~~~l~~l~~~l 692 (798)
T Consensus 219 L~~--------------------~~~~Ri~sRl~e~~~~v~~~G~d~R~~~a~~k~~~~~~~l 261 (262)
T PRK08116 219 LKN--------------------QYGKRTYSRILEMCTPVKNEGKSYRREIAKEKLERLKELL 261 (262)
T ss_pred HHH--------------------HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 999--------------------8637999999867789985177887999999999999860