HHsearch alignment for GI: 254780163 and conserved domain: PRK08181

Probab=98.50  E-value=1.1e-06  Score=67.15  Aligned_cols=70  Identities=24%  Similarity=0.416  Sum_probs=36.3

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHC---CCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf             677874896676411668999999998548988345201445540467530---63431237899999998720389839
Q gi|254780163|r  223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIA---GTRYRGDFEERIKKIVKEIESYANAI  299 (798)
Q Consensus       223 R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---g~~~rg~fe~r~~~~~~~~~~~~~~i  299 (798)
T Consensus       104 ~~~~Nvil~Gp~GtGKThLA~Alg~~A~~-------~G~~V~f~~~~~L~~~L~~a~~~~~~~~~~~~l----~--~~dL  170 (269)
T PRK08181        104 AKGANLLLFGPPGGGKSHLAAAIGLALIE-------NGWRVLFTRTTDLVQKLQVARRELQLESAIAKL----D--KFDL  170 (269)
T ss_pred             HCCCEEEEECCCCCCHHHHHHHHHHHHHH-------CCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHH----H--CCCE
T ss_conf             64870899899998788999999999998-------799399978999999999977558399999997----4--4460


Q ss_pred             EEECCH
Q ss_conf             997361
Q gi|254780163|r  300 LYIDEI  305 (798)
Q Consensus       300 lfidei  305 (798)
T Consensus       171 LIiDe~  176 (269)
T PRK08181        171 LILDDL  176 (269)
T ss_pred             EEEHHC
T ss_conf             122010