HHsearch alignment for GI: 254780163 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=97.89  E-value=0.00011  Score=52.86  Aligned_cols=100  Identities=16%  Similarity=0.343  Sum_probs=70.3

Q ss_pred             EEEEECCCCHHHHHHHHHHHH---HCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHH-CCCEEEEECC
Q ss_conf             688614320038899999873---047733772068861246530110478000256444310035551-5851777404
Q gi|254780163|r  509 CYVFSGPTGVGKTEISKQLAF---ALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQ-NPYSVVLLDE  584 (798)
Q Consensus       509 ~flf~GptGvGKTelak~la~---~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~-~P~sVvl~DE  584 (798)
T Consensus       108 Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~~~L~~a~~------------~~~~~~~~~~l~~~dLLIiDe  175 (269)
T PRK08181        108 NLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARR------------ELQLESAIAKLDKFDLLILDD  175 (269)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH------------CCCHHHHHHHHHCCCEEEEHH
T ss_conf             08998999987889999999999987993999789999999999775------------583999999974446012201


Q ss_pred             HH--HCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHH
Q ss_conf             45--502899999999877750217799776125429999424214553
Q gi|254780163|r  585 IE--KSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEM  631 (798)
Q Consensus       585 iE--KAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~  631 (798)
T Consensus       176 ~G~~~~~~~~~~~lf~lI~~Ry-----e~------~S~IITSn~~~~~W  213 (269)
T PRK08181        176 LAYVTKDQAETSVLFELISARY-----ER------RSILITANQPFGEW  213 (269)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH-----CC------CCEEEECCCCHHHH
T ss_conf             0566799899999999999985-----78------88899889997788