HHsearch alignment for GI: 254780163 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.23 E-value=2.3e-10 Score=93.61 Aligned_cols=215 Identities=23% Similarity=0.301 Sum_probs=144.7
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHH------------HHE
Q ss_conf 58877548611222178999999998622677874-89667641166899999999854898834------------520
Q gi|254780163|r 194 LTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDI------------LLG 260 (798)
Q Consensus 194 LTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~------------l~~ 260 (798)
T Consensus 4 LarKYRP~~F~evIGQe~iv~~L~nAi~~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~g 83 (523)
T PRK08451 4 LALKYRPKHFDELIGQESVSKTLSLALDNNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALEG 83 (523)
T ss_pred HHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 44420899654404949999999999985996715875789986889999999999759999998988878889998648
Q ss_pred --EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--CC
Q ss_conf --1445540467530634312378999999987203----898399973616630155444344777888876630--26
Q gi|254780163|r 261 --ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALS--SG 332 (798)
Q Consensus 261 --~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~--rg 332 (798)
T Consensus 84 ~hpDViEiD------aasn~g--ID~IReLie~~~~~P~~gryKV~IIDEah~L---------t~~A~NALLKTLEEPP~ 146 (523)
T PRK08451 84 RHIDIIEMD------AASNRG--IDDIRNLIEQTKYKPSMARFKIFIIDEVHML---------TKEAFNALLKTLEEPPS 146 (523)
T ss_pred CCCCEEEEC------CCCCCC--HHHHHHHHHHHCCCCCCCCEEEEEEECCCCC---------CHHHHHHHHHHCCCCCC
T ss_conf 999855105------533368--9999999997235886797279998260304---------89999999997038987
Q ss_pred CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCC
Q ss_conf 60388730489999985201114320014430687868999999861276654103512111789999986542015556
Q gi|254780163|r 333 AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKL 412 (798)
Q Consensus 333 ~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~l 412 (798)
T Consensus 147 ~vvFILaTTep--~KLp---~TIlSRCQ~f~Fk~I~~~~I~~~L~~I~~~----E~i~~e~~AL~~IA~~a~GslRD--- 214 (523)
T PRK08451 147 YVKFILATTDP--LKLP---ATILSRTQHFRFKQIPQNSIISHLKTILNK----EGVSYEPEALEILARSGSGSLRD--- 214 (523)
T ss_pred CCEEEEECCCH--HHCH---HHHHHHHHCCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH---
T ss_conf 83799975994--7684---888742031103379999999999999998----39987999999999977894868---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 467988998653333211443221136578999866
Q gi|254780163|r 413 PDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI 448 (798)
Q Consensus 413 PdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~ 448 (798)
T Consensus 215 ---alslLdQ~i~~~--------~~~i~~~~v~~~l 239 (523)
T PRK08451 215 ---TLTLLDQAIIFC--------KNAITESKVADML 239 (523)
T ss_pred ---HHHHHHHHHHHC--------CCCCCHHHHHHHH
T ss_conf ---987999999847--------9987799999985