HHsearch alignment for GI: 254780163 and conserved domain: PRK08451

>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.23  E-value=2.3e-10  Score=93.61  Aligned_cols=215  Identities=23%  Similarity=0.301  Sum_probs=144.7

Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCCCCHH------------HHE
Q ss_conf             58877548611222178999999998622677874-89667641166899999999854898834------------520
Q gi|254780163|r  194 LTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGMVPDI------------LLG  260 (798)
Q Consensus       194 LTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~vp~~------------l~~  260 (798)
T Consensus         4 LarKYRP~~F~evIGQe~iv~~L~nAi~~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~g   83 (523)
T PRK08451          4 LALKYRPKHFDELIGQESVSKTLSLALDNNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALEG   83 (523)
T ss_pred             HHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf             44420899654404949999999999985996715875789986889999999999759999998988878889998648


Q ss_pred             --EEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHC--CC
Q ss_conf             --1445540467530634312378999999987203----898399973616630155444344777888876630--26
Q gi|254780163|r  261 --ARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES----YANAILYIDEIHTLVGAGSASGISVDASNLLKPALS--SG  332 (798)
Q Consensus       261 --~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~----~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~--rg  332 (798)
T Consensus        84 ~hpDViEiD------aasn~g--ID~IReLie~~~~~P~~gryKV~IIDEah~L---------t~~A~NALLKTLEEPP~  146 (523)
T PRK08451         84 RHIDIIEMD------AASNRG--IDDIRNLIEQTKYKPSMARFKIFIIDEVHML---------TKEAFNALLKTLEEPPS  146 (523)
T ss_pred             CCCCEEEEC------CCCCCC--HHHHHHHHHHHCCCCCCCCEEEEEEECCCCC---------CHHHHHHHHHHCCCCCC
T ss_conf             999855105------533368--9999999997235886797279998260304---------89999999997038987


Q ss_pred             CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCC
Q ss_conf             60388730489999985201114320014430687868999999861276654103512111789999986542015556
Q gi|254780163|r  333 AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKL  412 (798)
Q Consensus       333 ~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~l  412 (798)
T Consensus       147 ~vvFILaTTep--~KLp---~TIlSRCQ~f~Fk~I~~~~I~~~L~~I~~~----E~i~~e~~AL~~IA~~a~GslRD---  214 (523)
T PRK08451        147 YVKFILATTDP--LKLP---ATILSRTQHFRFKQIPQNSIISHLKTILNK----EGVSYEPEALEILARSGSGSLRD---  214 (523)
T ss_pred             CCEEEEECCCH--HHCH---HHHHHHHHCCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH---
T ss_conf             83799975994--7684---888742031103379999999999999998----39987999999999977894868---


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             467988998653333211443221136578999866
Q gi|254780163|r  413 PDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTI  448 (798)
Q Consensus       413 PdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~  448 (798)
T Consensus       215 ---alslLdQ~i~~~--------~~~i~~~~v~~~l  239 (523)
T PRK08451        215 ---TLTLLDQAIIFC--------KNAITESKVADML  239 (523)
T ss_pred             ---HHHHHHHHHHHC--------CCCCCHHHHHHHH
T ss_conf             ---987999999847--------9987799999985