HHsearch alignment for GI: 254780163 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.90 E-value=5.2e-07 Score=69.54 Aligned_cols=123 Identities=24% Similarity=0.334 Sum_probs=70.1
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC--CC-----C-EEEEEHHHHHCCCC
Q ss_conf 6653458999999999877520445657874068861432003889999987304--77-----3-37720688612465
Q gi|254780163|r 477 TVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL--GV-----Q-LLRFDMSEYMERHA 548 (798)
Q Consensus 477 ~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~--~~-----~-lir~dmsey~e~~~ 548 (798)
T Consensus 14 ~evIGQe~iv~~L~nAi~~~--------Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~--- 82 (523)
T PRK08451 14 DELIGQESVSKTLSLALDNN--------RLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALE--- 82 (523)
T ss_pred HHCCCCHHHHHHHHHHHHCC--------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC---
T ss_conf 44049499999999999859--------9671587578998688999999999975999999898887888999864---
Q ss_pred CCHHCCCCCHHC--------CCCCCCCCCHHHHHCC----CEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCC
Q ss_conf 301104780002--------5644431003555158----5177740445502899999999877750217799776125
Q gi|254780163|r 549 VSRLIGAPPGYV--------GFGQGGILADSVDQNP----YSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFR 616 (798)
Q Consensus 549 vs~LiGappGYv--------G~~egg~Lte~vr~~P----~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~ 616 (798)
T Consensus 83 -----g~hpDViEiDaasn~gID~IReLie~~~~~P~~gryKV~IIDEah~Lt~~A~NALLKTLEEP-----------P~ 146 (523)
T PRK08451 83 -----GRHIDIIEMDAASNRGIDDIRNLIEQTKYKPSMARFKIFIIDEVHMLTKEAFNALLKTLEEP-----------PS 146 (523)
T ss_pred -----CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC-----------CC
T ss_conf -----89998551055333689999999997235886797279998260304899999999970389-----------87
Q ss_pred CEEEEEECCC
Q ss_conf 4299994242
Q gi|254780163|r 617 NVILIMTTNA 626 (798)
Q Consensus 617 n~iii~TsN~ 626 (798)
T Consensus 147 ~vvFILaTTe 156 (523)
T PRK08451 147 YVKFILATTD 156 (523)
T ss_pred CCEEEEECCC
T ss_conf 8379997599