HHsearch alignment for GI: 254780163 and conserved domain: PRK08903
>PRK08903 hypothetical protein; Validated.
Probab=98.28 E-value=4.3e-05 Score=55.78 Aligned_cols=161 Identities=19% Similarity=0.292 Sum_probs=96.3
Q ss_pred EEEECCCCHHHHHHHHHHHH---HCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHH
Q ss_conf 88614320038899999873---047733772068861246530110478000256444310035551585177740445
Q gi|254780163|r 510 YVFSGPTGVGKTEISKQLAF---ALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIE 586 (798)
Q Consensus 510 flf~GptGvGKTelak~la~---~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiE 586 (798)
T Consensus 45 l~i~G~~G~GKTHLl~a~~~~~~~~~~~~~yl~~~~~~~~-----~~-------~----------~--~~~d~l~iDDi~ 100 (227)
T PRK08903 45 FYLWGEAGSGRSHLLQALVAAASEGGKNARYLDPASPLLA-----FD-------F----------D--PRAELYAVDDVE 100 (227)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHH-----HH-------H----------H--HCCCEEEEECCC
T ss_conf 9998999998889999999999806997499651104577-----74-------2----------0--018989996411
Q ss_pred HCCHH----HHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCC
Q ss_conf 50289----99999998777502177997761254299994242145533036898821114889999987288788177
Q gi|254780163|r 587 KSHPD----VLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNR 662 (798)
Q Consensus 587 KAh~~----v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnR 662 (798)
T Consensus 101 ~i~~~~q~~lF~l~N~~~~~~-------------~~~ll~s~~~~p~~--------------------l--~~~~DL~SR 145 (227)
T PRK08903 101 RLDDAQQIALFNLFNRVRAHG-------------KTALLVAGPAAPLA--------------------L--DVREDLRTR 145 (227)
T ss_pred CCCCHHHHHHHHHHHHHHHCC-------------CCEEEECCCCCHHH--------------------C--CCCHHHHHH
T ss_conf 489569999999999999729-------------94899718997120--------------------1--200899999
Q ss_pred CC--EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHH----------
Q ss_conf 68--289628899999999999999999999986698899988999999971898101532679999986----------
Q gi|254780163|r 663 LD--SIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHGYDVKMGARPLERIIKEH---------- 730 (798)
Q Consensus 663 id--~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~---------- 730 (798)
T Consensus 146 l~~gl~~~i~~pdde~~~~iL~~~-------a~~rgl--~l~~~v~~yl~~r~~R~---~~~L~~~l~~Ld~~sl~~kr~ 213 (227)
T PRK08903 146 LGWGLVYEVKPLSDEDKIAALKAA-------AAERGL--QLADEVPDYLLTHFRRD---MPSLMALLDALDRYSLEQKRA 213 (227)
T ss_pred HHCCCEEEEECCCHHHHHHHHHHH-------HHHCCC--CCCHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf 938973899797999999999999-------996299--99889999999983478---999999999999999982999
Q ss_pred HHHHHHHHHHC
Q ss_conf 23599999962
Q gi|254780163|r 731 VKVPLADEILF 741 (798)
Q Consensus 731 i~~~la~~il~ 741 (798)
T Consensus 214 iTi~lvkevLa 224 (227)
T PRK08903 214 VTLPLLREMLA 224 (227)
T ss_pred CCHHHHHHHHC
T ss_conf 99999999855