HHsearch alignment for GI: 254780163 and conserved domain: PRK09183

Probab=98.08  E-value=2.9e-05  Score=57.03  Aligned_cols=112  Identities=23%  Similarity=0.348  Sum_probs=66.5

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHC---CCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf             677874896676411668999999998548988345201445540467530---63431237899999998720389839
Q gi|254780163|r  223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIA---GTRYRGDFEERIKKIVKEIESYANAI  299 (798)
Q Consensus       223 R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---g~~~rg~fe~r~~~~~~~~~~~~~~i  299 (798)
T Consensus        99 ~~~~Nvil~G~~GtGKThLA~Alg~~A~~-------~G~~v~f~~~~~L~~~L~~a~~~~~~~~~l~r~l~----~-~dL  166 (258)
T PRK09183         99 ERNENIVLLGPSGVGKTHLAIALGYEAVR-------AGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVM----A-PRL  166 (258)
T ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHH-------CCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHC----C-CCE
T ss_conf             55886799899998689999999999998-------79939997899999999999876859999998743----4-651


Q ss_pred             EEECCHHHHHCCCCCCCCCCCHHHHHHHHHC-CCCE-EEEEEC--CHHHHHHHHHCCH
Q ss_conf             9973616630155444344777888876630-2660-388730--4899999852011
Q gi|254780163|r  300 LYIDEIHTLVGAGSASGISVDASNLLKPALS-SGAV-RCIGST--TYSEYRQFFEKDK  353 (798)
Q Consensus       300 lfideih~ligag~~~g~~~d~an~lkP~L~-rg~~-~~Igat--T~~ey~~~~e~d~  353 (798)
T Consensus       167 LIiDdlG~~------~~-~~~~~~~lfeli~~Rye~~S~IiTSn~~~~~W~~~f~~D~  217 (258)
T PRK09183        167 LIIDEIGYL------PF-SQEEANLFFQVIAKRYEKGAMILTSNLPFGQWDQTFAGDA  217 (258)
T ss_pred             EEEHHHHCC------CC-CHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCH
T ss_conf             443133154------68-8889999999999985767789988999789856516869