HHsearch alignment for GI: 254780163 and conserved domain: PRK09862

>PRK09862 putative ATP-dependent protease; Provisional.
Probab=97.89  E-value=0.00025  Score=50.32  Aligned_cols=145  Identities=22%  Similarity=0.391  Sum_probs=81.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEE-------------------
Q ss_conf             1122217899999999862267787489667641166899999999854898834520144-------------------
Q gi|254780163|r  203 VDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARI-------------------  263 (798)
Q Consensus       203 LDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i-------------------  263 (798)
T Consensus       190 ~~dv~Gq~~-akraleIAAA-GgHnlLl~GpPG~GKTMlA~rlp~ILPpLt~~e~lEv~~I~Svag~~~~~~~~~~rPfR  267 (506)
T PRK09862        190 LSDVVGQEQ-GKRGLEITAA-GGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFR  267 (506)
T ss_pred             HHHHCCCHH-HHHHHHHHHC-CCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf             565369799-9999999744-68865987699945989997751238998989999999999871898777754668503


Q ss_pred             ---EEEEHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEE---
Q ss_conf             ---5540467530634-312378999999987203898399973616630155444344777888876630266038---
Q gi|254780163|r  264 ---FSLDMGNLIAGTR-YRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRC---  336 (798)
Q Consensus       264 ---~~ld~~~l~ag~~-~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~~~~---  336 (798)
T Consensus       268 ~PHHs~S~~aliGGG~~~~----------PGEISLAH~GVLFLDElpEF---------~r~vLe~LRqPLE~g~I~IsRa  328 (506)
T PRK09862        268 SPHHSASLTAMVGGGAIPG----------PGEISLAHNGVLFLDELPEF---------ERRTLDALREPIESGQIHLSRT  328 (506)
T ss_pred             CCCCCCCHHHHHCCCCCCC----------CCCEEECCCCEEEECCHHCC---------CHHHHHHHHHHHCCCEEEEEEC
T ss_conf             7887654766637999999----------97222135757884550006---------8889998776224775999966


Q ss_pred             ------------EE---------------ECCHHHHHHHHHC-CHHHHHHCEE-EEECCCC
Q ss_conf             ------------87---------------3048999998520-1114320014-4306878
Q gi|254780163|r  337 ------------IG---------------STTYSEYRQFFEK-DKALVRRFQK-IDVSEPS  368 (798)
Q Consensus       337 ------------Ig---------------atT~~ey~~~~e~-d~al~rrF~~-i~v~ep~  368 (798)
T Consensus       329 ~~~~~~PA~F~LVaAmNPCPCG~~~~~~~~Ct~~~~~rY~~rlSGPllDRiDl~v~v~~~~  389 (506)
T PRK09862        329 RAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPP  389 (506)
T ss_pred             CCEEEECCHHHHEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCEEEEEECCCCC
T ss_conf             8679861533111103788888899997778989999998656622130364799816899