HHsearch alignment for GI: 254780163 and conserved domain: PRK12323

>PRK12323 DNA polymerase III subunits gamma and tau; Provisional.
Probab=98.91  E-value=2.7e-08  Score=78.73  Aligned_cols=197  Identities=21%  Similarity=0.263  Sum_probs=126.5

Q ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHHHCCC---------CCH----------
Q ss_conf             77548611222178999999998622677874-8966764116689999999985489---------883----------
Q gi|254780163|r  197 KVKKGKVDILVGRHEEINRTIQILCRRSKNNP-LYVGDPGVGKTAIAEGFAKQIVDGM---------VPD----------  256 (798)
Q Consensus       197 ~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~-~lvG~~gvGktaive~la~~i~~~~---------vp~----------  256 (798)
T Consensus         9 k~RP~~F~~~vGQ~~v~~~l~na~~~~r~~haylf~G~rGvGKTt~ari~Ak~lnc~~~~~~~g~~~~pcg~C~~C~~i~   88 (721)
T PRK12323          9 KWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKSLNCTGPDGEGGITAQPCGQCRACTEID   88 (721)
T ss_pred             HHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             40798665532859999999999971997544750279988898999999999768998667898788787765468775


Q ss_pred             HHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHH-HHHHHHC-
Q ss_conf             45201445540467530634312378999999987203---898-39997361663015544434477788-8876630-
Q gi|254780163|r  257 ILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASN-LLKPALS-  330 (798)
Q Consensus       257 ~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an-~lkP~L~-  330 (798)
T Consensus        89 ~g~~~d~~EiDaas------~~~v--~~~r~l~~~~~y~P~~~~~KvyiiDevhmls---------~~afnalLK-tlEe  150 (721)
T PRK12323         89 AGRFVDYIEMDAAS------NRGV--DEMAQLLDQAVYAPTAGRFKVYMIDEVHMLT---------NHAFNAMLK-TLEE  150 (721)
T ss_pred             CCCCCCEEEEECCC------CCCH--HHHHHHHHHCCCCCCCCCEEEEEEECCCCCC---------HHHHHHHHH-HHCC
T ss_conf             68987647743676------7888--9999999854558876644699985400058---------999999998-4017


Q ss_pred             -CCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCC
Q ss_conf             -2660388730489999985201114320014430687868999999861276654103512111789999986542015
Q gi|254780163|r  331 -SGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTS  409 (798)
Q Consensus       331 -rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~  409 (798)
T Consensus       151 PP~hv~FilaTT~~--~Kip--~TilSR-c~~f~~~~~~~~~i~~~l~~i~----~~E~i~~~~~al~~ia~~a~Gs~RD  221 (721)
T PRK12323        151 PPPHVKFILATTDP--QKIP--VTVLSR-CLQFNLKQMPPGHIVSHLDAIL----GQEGIGHEGNALRLLAQAAHGSMRD  221 (721)
T ss_pred             CCCCEEEEEECCCH--HHCC--HHHHHH-HHHCCCCCCCHHHHHHHHHHHH----HHCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf             97553899943863--4485--889877-6542347899999999999999----9839977999999999975896476


Q ss_pred             CCCHHHHHHHHHHHHHH
Q ss_conf             55646798899865333
Q gi|254780163|r  410 RKLPDKAIDVIDEAGAS  426 (798)
Q Consensus       410 r~lPdkAidllDea~a~  426 (798)
T Consensus       222 ------alslldQaia~  232 (721)
T PRK12323        222 ------ALSLTDQAIAY  232 (721)
T ss_pred             ------HHHHHHHHHHH
T ss_conf             ------88899999986