HHsearch alignment for GI: 254780163 and conserved domain: PRK12377

Probab=98.63  E-value=6.2e-07  Score=68.99  Aligned_cols=122  Identities=25%  Similarity=0.340  Sum_probs=73.1

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH---HCCCCEEEEEHHHHHCCCCCCHHCCCCC
Q ss_conf             4589999999998775204456578740688614320038899999873---0477337720688612465301104780
Q gi|254780163|r  481 GQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAF---ALGVQLLRFDMSEYMERHAVSRLIGAPP  557 (798)
Q Consensus       481 GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~---~~~~~lir~dmsey~e~~~vs~LiGapp  557 (798)
T Consensus        82 ~~~~a~~~a~~~~----~~F~~---~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~dLv~-----~L~~a--  147 (248)
T PRK12377         82 GQRYALSQAKSIA----DELMT---GCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVMS-----RLHES--  147 (248)
T ss_pred             HHHHHHHHHHHHH----HHHHC---CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHH-----HHHHH--
T ss_conf             8999999999999----98731---8860899899998788999999999998799699988999999-----99999--


Q ss_pred             HHCCCCCCCCCCHH-HH-HCCCEEEEECCH--HHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHH
Q ss_conf             00256444310035-55-158517774044--5502899999999877750217799776125429999424214553
Q gi|254780163|r  558 GYVGFGQGGILADS-VD-QNPYSVVLLDEI--EKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEM  631 (798)
Q Consensus       558 GYvG~~egg~Lte~-vr-~~P~sVvl~DEi--EKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~  631 (798)
T Consensus       148 ----~~~-g~~~~k~l~~l~~~dLLIIDElG~~~~s~~~~~llfqlI~~Ry~~-~---------ks~IiTTNL~f~ew  210 (248)
T PRK12377        148 ----YDN-GQSGEKFLQELCKVDLLVLDEIGIQRETKNEQVVLNQIIDRRTAS-M---------RSVGMLTNLNHEAM  210 (248)
T ss_pred             ----HHC-CCCHHHHHHHHHCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHHC-C---------CCEEEECCCCHHHH
T ss_conf             ----984-850999999973389898600057889867999999999999855-7---------98689758997799