HHsearch alignment for GI: 254780163 and conserved domain: PRK12377

Probab=97.96  E-value=7.9e-05  Score=53.84  Aligned_cols=114  Identities=18%  Similarity=0.384  Sum_probs=69.7

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHC---CCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             77874896676411668999999998548988345201445540467530---634312378999999987203898399
Q gi|254780163|r  224 SKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIA---GTRYRGDFEERIKKIVKEIESYANAIL  300 (798)
Q Consensus       224 ~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---g~~~rg~fe~r~~~~~~~~~~~~~~il  300 (798)
T Consensus       100 ~~~NlIf~G~pGtGKTHLA~AIg~~a~~-------~G~sVlF~t~~dLv~~L~~a~~~g~~~~k---~l~~l~~~--dLL  167 (248)
T PRK12377        100 GCTNFVFSGKPGTGKNHLAAAIGNRLLA-------KGRSVIVVTVPDVMSRLHESYDNGQSGEK---FLQELCKV--DLL  167 (248)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHH-------CCCEEEEEEHHHHHHHHHHHHHCCCCHHH---HHHHHHCC--CEE
T ss_conf             8860899899998788999999999998-------79969998899999999999984850999---99997338--989


Q ss_pred             EECCHHHHHCCCCCCCCCCCHHHHHHHHHC-C-CCEEEEEECC---HHHHHHHHHCCHHHHH
Q ss_conf             973616630155444344777888876630-2-6603887304---8999998520111432
Q gi|254780163|r  301 YIDEIHTLVGAGSASGISVDASNLLKPALS-S-GAVRCIGSTT---YSEYRQFFEKDKALVR  357 (798)
Q Consensus       301 fideih~ligag~~~g~~~d~an~lkP~L~-r-g~~~~IgatT---~~ey~~~~e~d~al~r  357 (798)
T Consensus       168 IIDElG------~~~~-s~~~~~llfqlI~~Ry~~~ks~IiTTNL~f~ew~~il-gdailDR  221 (248)
T PRK12377        168 VLDEIG------IQRE-TKNEQVVLNQIIDRRTASMRSVGMLTNLNHEAMSTLL-GERVMDR  221 (248)
T ss_pred             EEHHCC------CCCC-CHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH-HHHHHHH
T ss_conf             860005------7889-8679999999999998557986897589977998887-5999999