HHsearch alignment for GI: 254780163 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=98.16 E-value=0.00021 Score=50.78 Aligned_cols=205 Identities=14% Similarity=0.233 Sum_probs=112.3
Q ss_pred CCHHHHHHHCHHHHHHH-HHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEHHHHHCCC
Q ss_conf 00024665345899999-9999877520445657874068861432003889999987304---7733772068861246
Q gi|254780163|r 472 EKNLGTVVYGQEEAIKK-LSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---GVQLLRFDMSEYMERH 547 (798)
Q Consensus 472 ~~~l~~~v~GQ~~ai~~-v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~---~~~lir~dmsey~e~~ 547 (798)
T Consensus 107 ~ytFd~FVvG~~N~lA~~aa~~va~--~~~~~~g~~yNPLfIyG~~GlGKTHLL~AIgn~i~~~~~kV~Yvtae~F~~~~ 184 (455)
T PRK12422 107 EMTFANFLVTPENDLPFRILQEFAK--VSEQGKGFPFNPIYLFGPEGSGKTHLMQAAVSALRESGGKILYVSSELFTEHL 184 (455)
T ss_pred CCCCCCEEECCCCHHHHHHHHHHHH--CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
T ss_conf 7835583315860999999999983--75535887678758878999978999999999853799869997499999999
Q ss_pred CCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHH--CCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECC
Q ss_conf 5301104780002564443100355515851777404455--02899999999877750217799776125429999424
Q gi|254780163|r 548 AVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEK--SHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTN 625 (798)
Q Consensus 548 ~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEK--Ah~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN 625 (798)
T Consensus 185 v~a-i--------~~~~~~~Fr~~y--r~~DvLLIDDIQfl~gK~~tqeEff~tfN--~L~~~~--------KQIVitsD 243 (455)
T PRK12422 185 VSA-I--------RSGEMQRFRSFY--RNVDALFIEDIEVFSGKGATQEEFFHTFN--SLHTEG--------KLIVISSS 243 (455)
T ss_pred HHH-H--------HCCCHHHHHHHH--HCCCEEEEEHHHHHHCCHHHHHHHHHHHH--HHHHCC--------CEEEEECC
T ss_conf 999-9--------758899999999--63887763147887284889999999999--999859--------96999689
Q ss_pred CCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHH
Q ss_conf 21455330368988211148899999872887881776828962889999999999999999999998669889998899
Q gi|254780163|r 626 AGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEV 705 (798)
Q Consensus 626 ~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~ 705 (798)
T Consensus 244 r~P~el-------------~~l~~RL~SRf~~------GL~v~I~~Pd~etr~~Il~~k~-------~~~~--~~l~~ev 295 (455)
T PRK12422 244 YAPGDL-------------KAMEERLISRFEW------GIAIPIHPLTREGLRSFLMRQA-------EQLS--IRIEETA 295 (455)
T ss_pred CCHHHH-------------HHHHHHHHHHHHC------CEEECCCCCCHHHHHHHHHHHH-------HHCC--CCCCHHH
T ss_conf 895765-------------1268999988637------6132168999899999999999-------8718--8884468
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999971898101532679999986
Q gi|254780163|r 706 INWLVSHGYDVKMGARPLERIIKEH 730 (798)
Q Consensus 706 ~~~l~~~~~~~~~GAR~l~r~i~~~ 730 (798)
T Consensus 296 ~~~iA~~i~~---niReLeGal~~l 317 (455)
T PRK12422 296 LDFLIQALSS---NVKTLLHALTLL 317 (455)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHH
T ss_conf 9999999755---179999999999