HHsearch alignment for GI: 254780163 and conserved domain: PTZ00112

>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=96.86  E-value=0.0068  Score=39.93  Aligned_cols=215  Identities=17%  Similarity=0.224  Sum_probs=120.3

Q ss_pred             CHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH-----C-----CCCEEEEEHHH
Q ss_conf             0024665345899999999987752044565787406886143200388999998730-----4-----77337720688
Q gi|254780163|r  473 KNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFA-----L-----GVQLLRFDMSE  542 (798)
Q Consensus       473 ~~l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~-----~-----~~~lir~dmse  542 (798)
T Consensus       263 ~~vpe~lpcRe~E~~~I~~Fie---~~i~q~Gt-G~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMk  338 (650)
T PTZ00112        263 LVVPEYILGREKEAKEIRTFLE---TGIKQGGT-GQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVN  338 (650)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHH---HHCCCCCC-CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf             2577447770789999999998---64116886-6569997899998003699999999999970899981599973637


Q ss_pred             HHCCCCCCH-----HCCCCCHHCCCCCC-CCCCHH-HHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECC
Q ss_conf             612465301-----10478000256444-310035-55158517774044550289999999987775021779977612
Q gi|254780163|r  543 YMERHAVSR-----LIGAPPGYVGFGQG-GILADS-VDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISF  615 (798)
Q Consensus       543 y~e~~~vs~-----LiGappGYvG~~eg-g~Lte~-vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf  615 (798)
T Consensus       339 Lt~P~qaY~~L~e~Ltg~k~~--~~~~A~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~VlYNLFdWPT~~~Sk------  410 (650)
T PTZ00112        339 LVHPNAAYRVFYKKLFNKKPP--NALNSYKELDKLFNNNRTPSILIVDEADYIVTKTQKVLFTLFDWPTKKNSK------  410 (650)
T ss_pred             CCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCCCCCCCE------
T ss_conf             798788999999998489888--678999999998268997189997157777636774577736688988870------


Q ss_pred             CCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54299994242145533036898821114889999987288788177682896288999999999999999999999866
Q gi|254780163|r  616 RNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEK  695 (798)
Q Consensus       616 ~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~  695 (798)
T Consensus       411 --LIVIaIANT---------MDL----P-ERL~~RVsSRLG---l----tRltF~PYt~~QL~eII~sRL~~~-------  460 (650)
T PTZ00112        411 --LILIIISNT---------MDL----P-YKMKPSCRSRLA---F----GRLVFSPYKYQQIEKVIKERLENC-------  460 (650)
T ss_pred             --EEEEEEEEC---------CCC----C-HHHHHHHHHHCC---C----CEECCCCCCHHHHHHHHHHHHCCC-------
T ss_conf             --799998506---------786----0-656666555228---8----500439989999999999986267-------


Q ss_pred             CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             9889998899999997189810153267999998623
Q gi|254780163|r  696 GISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVK  732 (798)
Q Consensus       696 ~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~  732 (798)
T Consensus       461 --~-~f~~dAIQl~ARKVAavSGDARRALdICRRAvE  494 (650)
T PTZ00112        461 --E-IIDHTALQLCARRVTNYSGDMRKALQICKLAFE  494 (650)
T ss_pred             --C-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             --7-788789999988887503148999999999997