HHsearch alignment for GI: 254780163 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=96.86 E-value=0.0068 Score=39.93 Aligned_cols=215 Identities=17% Similarity=0.224 Sum_probs=120.3
Q ss_pred CHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH-----C-----CCCEEEEEHHH
Q ss_conf 0024665345899999999987752044565787406886143200388999998730-----4-----77337720688
Q gi|254780163|r 473 KNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFA-----L-----GVQLLRFDMSE 542 (798)
Q Consensus 473 ~~l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~-----~-----~~~lir~dmse 542 (798)
T Consensus 263 ~~vpe~lpcRe~E~~~I~~Fie---~~i~q~Gt-G~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMk 338 (650)
T PTZ00112 263 LVVPEYILGREKEAKEIRTFLE---TGIKQGGT-GQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVN 338 (650)
T ss_pred CCCCCCCCCCHHHHHHHHHHHH---HHCCCCCC-CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf 2577447770789999999998---64116886-6569997899998003699999999999970899981599973637
Q ss_pred HHCCCCCCH-----HCCCCCHHCCCCCC-CCCCHH-HHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECC
Q ss_conf 612465301-----10478000256444-310035-55158517774044550289999999987775021779977612
Q gi|254780163|r 543 YMERHAVSR-----LIGAPPGYVGFGQG-GILADS-VDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISF 615 (798)
Q Consensus 543 y~e~~~vs~-----LiGappGYvG~~eg-g~Lte~-vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf 615 (798)
T Consensus 339 Lt~P~qaY~~L~e~Ltg~k~~--~~~~A~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~VlYNLFdWPT~~~Sk------ 410 (650)
T PTZ00112 339 LVHPNAAYRVFYKKLFNKKPP--NALNSYKELDKLFNNNRTPSILIVDEADYIVTKTQKVLFTLFDWPTKKNSK------ 410 (650)
T ss_pred CCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCCCCCCCE------
T ss_conf 798788999999998489888--678999999998268997189997157777636774577736688988870------
Q ss_pred CCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 54299994242145533036898821114889999987288788177682896288999999999999999999999866
Q gi|254780163|r 616 RNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEK 695 (798)
Q Consensus 616 ~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~ 695 (798)
T Consensus 411 --LIVIaIANT---------MDL----P-ERL~~RVsSRLG---l----tRltF~PYt~~QL~eII~sRL~~~------- 460 (650)
T PTZ00112 411 --LILIIISNT---------MDL----P-YKMKPSCRSRLA---F----GRLVFSPYKYQQIEKVIKERLENC------- 460 (650)
T ss_pred --EEEEEEEEC---------CCC----C-HHHHHHHHHHCC---C----CEECCCCCCHHHHHHHHHHHHCCC-------
T ss_conf --799998506---------786----0-656666555228---8----500439989999999999986267-------
Q ss_pred CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9889998899999997189810153267999998623
Q gi|254780163|r 696 GISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVK 732 (798)
Q Consensus 696 ~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~ 732 (798)
T Consensus 461 --~-~f~~dAIQl~ARKVAavSGDARRALdICRRAvE 494 (650)
T PTZ00112 461 --E-IIDHTALQLCARRVTNYSGDMRKALQICKLAFE 494 (650)
T ss_pred --C-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf --7-788789999988887503148999999999997