HHsearch alignment for GI: 254780163 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=98.46 E-value=7.4e-08 Score=75.60 Aligned_cols=224 Identities=25% Similarity=0.343 Sum_probs=121.0
Q ss_pred HHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCC---
Q ss_conf 65345899999999987752044565787406886143200388999998730477337720688612465301104---
Q gi|254780163|r 478 VVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIG--- 554 (798)
Q Consensus 478 ~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiG--- 554 (798)
T Consensus 195 dv~GQ~~akRAleIA----aAGGH-------Nlll~GPPGsGKTmla~r~~giLP~----L~~~EalE~~~v~S~~~~l~ 259 (505)
T TIGR00368 195 DVKGQQHAKRALEIA----AAGGH-------NLLLLGPPGSGKTMLASRLQGILPP----LTNEEALETARVLSLVGKLI 259 (505)
T ss_pred CCCCHHHCCHHHHHH----HHCCC-------CEEEECCCCCCHHHHHHHHHCCCCC----CCCHHHHHHHHHHHHHHHHH
T ss_conf 254510110267775----31356-------4376782496268999875105786----45126666788888887576
Q ss_pred ------------------CCCHHCCCC---CCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCC-CE
Q ss_conf ------------------780002564---44310035551585177740445502899999999877750217799-77
Q gi|254780163|r 555 ------------------APPGYVGFG---QGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSG-KK 612 (798)
Q Consensus 555 ------------------appGYvG~~---egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~G-r~ 612 (798)
T Consensus 260 ~~~~~~rQRPFR~PHHsAS~~~lvGGG~~P~PGEiSLAh----nGvLFLDEl~EF~r~vL~~LR~PlEdg~i~iSRa~~k 335 (505)
T TIGR00368 260 DRKQWKRQRPFRSPHHSASKPALVGGGSIPKPGEISLAH----NGVLFLDELPEFKRKVLDALREPLEDGSISISRAKAK 335 (505)
T ss_pred HCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHC----CCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCH
T ss_conf 523011068677865002566640587522285120200----5410432220446789987178742670688632201
Q ss_pred EC-CCCEE-EEEECCCCHHHHHHCCCCCCCCCCHH---HHHH--HHHHHCCHHHHCCCCEEEECCCCC-HHHHHHHH---
Q ss_conf 61-25429-99942421455330368988211148---8999--998728878817768289628899-99999999---
Q gi|254780163|r 613 IS-FRNVI-LIMTTNAGALEMSKARIGFGSSRNDD---ADKE--ALRNFLSPEFLNRLDSIIPFFPLS-SDIIRQVV--- 681 (798)
Q Consensus 613 vd-f~n~i-ii~TsN~G~~~~~~~~~g~~~~~~~~---~~~~--~l~~~f~peflnRid~ii~F~~l~-~~~~~~i~--- 681 (798)
T Consensus 336 i~kyPA~FqL~aAmNp-------cPcG~~~~~~~~c~cSp~q~~~Yl~kLsgp~LDRiDl~v~v~~~~n~~~L~~t~~~G 408 (505)
T TIGR00368 336 IFKYPARFQLVAAMNP-------CPCGHYGGKITHCRCSPQQISRYLNKLSGPFLDRIDLSVEVPLLPNPGLLSETGVRG 408 (505)
T ss_pred HHCCCHHHHHHHHHCC-------CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCHHCCEECCCCCCCCCHHHHCCCCC
T ss_conf 0008724556756178-------877677787444658978999998742711200011400137888741344247899
Q ss_pred ------HHHHHHHHHH-HH--HC--CCEE-------------EECHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf ------9999999999-98--66--9889-------------9988999999971898101532679999
Q gi|254780163|r 682 ------HKFIMKLELQ-LQ--EK--GISF-------------HFSEEVINWLVSHGYDVKMGARPLERII 727 (798)
Q Consensus 682 ------~~~l~~l~~~-l~--~~--~i~l-------------~~~~~~~~~l~~~~~~~~~GAR~l~r~i 727 (798)
T Consensus 409 ESS~~vkqrv~kaR~~q~~R~~k~A~I~~Na~L~s~~i~~FC~L~~~~~~~Le~~L~kLglS~RA~~riL 478 (505)
T TIGR00368 409 ESSAEVKQRVLKAREIQIKRYEKFAKINLNAELNSDEIEQFCKLDEKDANLLEGALNKLGLSVRATHRIL 478 (505)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 5267899999999999997303545503373358245654057156889999999987085166887688