HHsearch alignment for GI: 254780163 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=99.24 E-value=6.2e-11 Score=97.71 Aligned_cols=130 Identities=25% Similarity=0.478 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCC
Q ss_conf 58999999999877520445657874068861432003889999987304773377206886124653011047800025
Q gi|254780163|r 482 QEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVG 561 (798)
Q Consensus 482 Q~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG 561 (798)
T Consensus 3 ~t~~v~~v~~R~l~y---L~-~G~Pv---Hl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd---~eL~~~DLvG~~~g~~~ 72 (265)
T TIGR02640 3 ETDAVKRVTSRALRY---LK-SGYPV---HLRGPAGTGKTTLAMHVARKRDRPVVLINGD---AELTTSDLVGSYAGYTR 72 (265)
T ss_pred CCHHHHHHHHHHHHH---HC-CCCCE---EEECCCCCCHHHHHHHHHHHCCCCEEEEECC---CCCCCCCCCCCCCCCEE
T ss_conf 772379999987663---22-78866---7447888556899999997368968998658---23265442315467522
Q ss_pred -------------CCC-------CCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCC----CCCCEE----
Q ss_conf -------------644-------4310035551585177740445502899999999877750217----799776----
Q gi|254780163|r 562 -------------FGQ-------GGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTD----QSGKKI---- 613 (798)
Q Consensus 562 -------------~~e-------gg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd----~~Gr~v---- 613 (798)
T Consensus 73 ~kv~DqfihnV~K~~d~~~~~W~D~rLt~Av~-eG~T-LVYdEF~RskP~~nNVLLSvlEE~vL~LPg~~~~~~Yv~VhP 150 (265)
T TIGR02640 73 KKVVDQFIHNVVKLEDIVRQNWVDNRLTLAVR-EGFT-LVYDEFTRSKPETNNVLLSVLEEGVLELPGKRGESRYVDVHP 150 (265)
T ss_pred EEEEECCEEEEECCCCCCCCCCCCCHHHHHHH-CCCE-EEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
T ss_conf 22320121113425122002667835789975-6972-766475788620456567555523215888787787225788
Q ss_pred CCCCEEEEEECCC
Q ss_conf 1254299994242
Q gi|254780163|r 614 SFRNVILIMTTNA 626 (798)
Q Consensus 614 df~n~iii~TsN~ 626 (798)
T Consensus 151 ~FR---~IfTSNp 160 (265)
T TIGR02640 151 EFR---VIFTSNP 160 (265)
T ss_pred CCC---EEECCCC
T ss_conf 702---4631487