HHsearch alignment for GI: 254780163 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=97.00 E-value=0.0019 Score=43.97 Aligned_cols=152 Identities=23% Similarity=0.296 Sum_probs=96.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH------HCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHH---------
Q ss_conf 74896676411668999999998------548988345201445540467530634312378999999987---------
Q gi|254780163|r 227 NPLYVGDPGVGKTAIAEGFAKQI------VDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKE--------- 291 (798)
Q Consensus 227 n~~lvG~~gvGktaive~la~~i------~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~--------- 291 (798)
T Consensus 23 PvHl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd-------~eL~~~DLvG~~~g~~~~kv~DqfihnV~K~~d~~~~~W~ 95 (265)
T TIGR02640 23 PVHLRGPAGTGKTTLAMHVARKRDRPVVLINGD-------AELTTSDLVGSYAGYTRKKVVDQFIHNVVKLEDIVRQNWV 95 (265)
T ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-------CCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCC
T ss_conf 667447888556899999997368968998658-------2326544231546752222320121113425122002667
Q ss_pred ------HCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC------------------CCEEEEEECCHHHHHH
Q ss_conf ------2038983999736166301554443447778888766302------------------6603887304899999
Q gi|254780163|r 292 ------IESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSS------------------GAVRCIGSTTYSEYRQ 347 (798)
Q Consensus 292 ------~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~r------------------g~~~~IgatT~~ey~~ 347 (798)
T Consensus 96 D~rLt~Av~eG~-TLVYdEF~------Rsk---P~~nNVLLSvlEE~vL~LPg~~~~~~Yv~VhP~FR~IfTSNp~EYAG 165 (265)
T TIGR02640 96 DNRLTLAVREGF-TLVYDEFT------RSK---PETNNVLLSVLEEGVLELPGKRGESRYVDVHPEFRVIFTSNPVEYAG 165 (265)
T ss_pred CCHHHHHHHCCC-EEEECCCC------CCC---CHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCC
T ss_conf 835789975697-27664757------886---20456567555523215888787787225788702463148701057
Q ss_pred HHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHH
Q ss_conf 852011143200144306878689999998612766541035121117899999865
Q gi|254780163|r 348 FFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSV 404 (798)
Q Consensus 348 ~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ 404 (798)
T Consensus 166 Vh~~QDALlDRL~ti~~D~~D~~~e~ai~~~---------~t~~~~~~a~~IV~lv~ 213 (265)
T TIGR02640 166 VHETQDALLDRLVTISMDYPDEDTETAILRA---------KTDVAEESAATIVRLVR 213 (265)
T ss_pred CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH---------HHCCCHHHHHHHHHHHH
T ss_conf 6771667766440045785444789999998---------60612467899999999