>TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator; InterPro: IPR014264 Members of this protein family share full-length homology with (but do not include) the acetoacetate metabolism regulatory protein AtoC (see Q06065 from SWISSPROT). These proteins have a Fis family DNA binding sequence, a response regulator receiver domain, and sigma-54 interaction domain. They are found strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria, where members of IPR014265 from INTERPRO and IPR014266 from INTERPRO also occur..

Probab=97.27 E-value=0.0013 Score=45.15 Aligned_cols=142 Identities=23% Similarity=0.432 Sum_probs=98.1 Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCC--EEEECCCCCHHHHHHHHHHHH----------HHCCCCCHHHHEEEEEEEEHHH Q ss_conf 1122217899999999862267787--489667641166899999999----------8548988345201445540467 Q gi|254780163|r 203 VDILVGRHEEINRTIQILCRRSKNN--PLYVGDPGVGKTAIAEGFAKQ----------IVDGMVPDILLGARIFSLDMGN 270 (798) Q Consensus 203 LDPVIGRd~EI~riiqIL~RR~KNn--~~lvG~~gvGktaive~la~~----------i~~~~vp~~l~~~~i~~ld~~~ 270 (798) T Consensus 141 ~~Gli~~~~~m~kic~tIekvA~sd~TvllLGESGTGKEV~ArA~H~~S~R~~~~FVAINCAAIPEnLLEsELFGyEK-- 218 (451) T TIGR02915 141 LEGLITSSPGMQKICRTIEKVAPSDITVLLLGESGTGKEVLARALHELSDRKDKRFVAINCAAIPENLLESELFGYEK-- 218 (451) T ss_pred CCCEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCC-- T ss_conf 365220685067898886521200001301046671178999898420578977734441674575246677603410-- Q ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH----------------H-CCCCCCCCCCCHHHHHHHHHCCCC Q ss_conf 53063431237899999998720389839997361663----------------0-155444344777888876630266 Q gi|254780163|r 271 LIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTL----------------V-GAGSASGISVDASNLLKPALSSGA 333 (798) Q Consensus 271 l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~l----------------i-gag~~~g~~~d~an~lkP~L~rg~ 333 (798) T Consensus 219 --------GAFTGA~k~T~GKIE~A~~GTLFLDEIGDLP~~LQAKLLRFLQErVIER~GGR~eIPVD------------- 277 (451) T TIGR02915 219 --------GAFTGAVKQTLGKIEYAHGGTLFLDEIGDLPLNLQAKLLRFLQERVIERLGGREEIPVD------------- 277 (451) T ss_pred --------HHHHHHHCCCCCCEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC------------- T ss_conf --------12422003477616750688301111220676689999987546663105887245614------------- Q ss_pred EEEEEECCHHHHHHHHHCCHHHHHHCEE---EEECCCC Q ss_conf 0388730489999985201114320014---4306878 Q gi|254780163|r 334 VRCIGSTTYSEYRQFFEKDKALVRRFQK---IDVSEPS 368 (798) Q Consensus 334 ~~~IgatT~~ey~~~~e~d~al~rrF~~---i~v~ep~ 368 (798) T Consensus 278 VRvvCATnqd-L~~~i~eg~FREDLfYRl~Eisi~iPP 314 (451) T TIGR02915 278 VRVVCATNQD-LKKMIAEGTFREDLFYRLAEISITIPP 314 (451) T ss_pred EEEEECCCHH-HHHHHHCCCCCCCCEEEEEEEEEECCC T ss_conf 2675032246-899985489720001346667862588

HHsearch alignment for GI: 254780163 and conserved domain: TIGR02915