HHsearch alignment for GI: 254780163 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=100.00 E-value=0 Score=1848.71 Aligned_cols=729 Identities=36% Similarity=0.611 Sum_probs=655.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCH--HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 4389999999999999982899511999999982074--68999998599989999999999641365457788867764
Q gi|254780163|r 4 FSENLEKVLHQALVLANERNHEYATLEHLLLALIDDS--DAAIVMLSCNVDLKVLKNNLLNYIDNDSSNKLKNGFRVECK 81 (798)
Q Consensus 4 fS~~a~~vL~~A~~lAk~~~H~~Vt~EHLLLaLL~d~--~~~~iL~~~giD~~~Lk~~Le~~L~~~~~~~~~~~~~~ei~ 81 (798)
T Consensus 1 Lt~~~~~aL~~A~~~A~~~~H~~I~~eHLLlaLl~~~~~~~~~iL~~~gvd~~~l~~~l~~~l~~~~-----~~~~~~~~ 75 (852)
T TIGR03345 1 LNPTSRRALEQAAALCVARGHPEVELEHWLLALLDQPDSDLAAILRHFGVDLGRLKADLARALDKLP-----RGNTRTPV 75 (852)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC-----CCCCCCCC
T ss_conf 9889999999999999985998138999999998399747999999869999999999999996389-----89999888
Q ss_pred CCHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHCCCCHHHHHHHH---CCCCHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf 69899999999999999-809981259998787873774299999998---49998999999983000000011121102
Q gi|254780163|r 82 PTSSFQRVVQRAVLHVQ-STGRGIVTGANILVALFSEPDSHATYFLQE---QEMTLYDAVNFISHGISKRKEFANFQSKL 157 (798)
Q Consensus 82 ~S~~l~rVL~~A~~~A~-~~G~~~I~~eHLLLALL~e~ds~a~~iL~~---~gis~~~v~~~i~~~~~~~~~~~~~~~~~ 157 (798)
T Consensus 76 ~s~~l~~vl~~A~~~a~~~~g~~~I~~~hlLlall~~~~~~~~~~~~~~~l~~i~~~~l~~~~~~~~~~~~~~~~----- 150 (852)
T TIGR03345 76 FSPHLVELLQEAWLLASLELGDGRIRSGHLLLALLTDPELRRLLGSISPELAKIDREALREALPALVEGSAEASA----- 150 (852)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC-----
T ss_conf 787999999999999999859987739999999825962567899998885358999999999998356743333-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 44321000001244444445555445530356544258877548611222178999999998622677874896676411
Q gi|254780163|r 158 NVDGSSAGSDGEGFVNDYQAKTDLNLFPALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVG 237 (798)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LdkFg~DLTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvG 237 (798)
T Consensus 151 ----------~~~~~~~~~~~~~~~~~~~L~ky~~dLt~~A~~gklDPvIGRd~EI~r~iqIL~Rr~KNNPiLVGepGVG 220 (852)
T TIGR03345 151 ----------AAADAGPAAAAAGAAGTSALDQYTTDLTAQAREGKIDPVLGRDDEIRQMIDILLRRRQNNPILTGEAGVG 220 (852)
T ss_pred ----------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf ----------3334566677777666448999978899999839999886949999999999986247997465799987
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC-EEEEECCHHHHHCCCCCCC
Q ss_conf 668999999998548988345201445540467530634312378999999987203898-3999736166301554443
Q gi|254780163|r 238 KTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYAN-AILYIDEIHTLVGAGSASG 316 (798)
Q Consensus 238 ktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~-~ilfideih~ligag~~~g 316 (798)
T Consensus 221 KTAIvEGLA~rI~~g~VP~~L~~~~i~sLDlg~LvAGtkyRGeFEeRlk~ii~ei~~~~~~iILFIDEiHtlvGAG~~~G 300 (852)
T TIGR03345 221 KTAVVEGLALRIAAGDVPPALRNVRLLSLDLGLLQAGASVKGEFENRLKSVIDEVKASPQPIILFIDEAHTLIGAGGQAG 300 (852)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCC
T ss_conf 99999999999976999867743856786788886403576359999999999998489976999634877528998888
Q ss_pred CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHH
Q ss_conf 44777888876630266038873048999998520111432001443068786899999986127665410351211178
Q gi|254780163|r 317 ISVDASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAI 396 (798)
Q Consensus 317 ~~~d~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al 396 (798)
T Consensus 301 -~~DaaNiLKPaLarGelr~IGATT~~EYrk~iEkD~AL~RRFq~V~V~EPs~eeti~IL~glk~~yE~hH~V~i~d~Ai 379 (852)
T TIGR03345 301 -QGDAANLLKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKVEEPDEETAIRMLRGLAPVLEKHHGVLILDEAV 379 (852)
T ss_pred -CCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHH
T ss_conf -6227887517873787349983578999888642688996247552799987999999998799985547968708999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q ss_conf 99999865420155564679889986533332114432------------------------------------------
Q gi|254780163|r 397 RAAVQLSVRHFTSRKLPDKAIDVIDEAGASQILQPLSK------------------------------------------ 434 (798)
Q Consensus 397 ~~av~ls~ryi~~r~lPdkAidllDea~a~~~~~~~~~------------------------------------------ 434 (798)
T Consensus 380 ~aAv~LS~RYI~dR~LPDKAIDLlDeA~A~~~~~~~~~p~~l~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~ 459 (852)
T TIGR03345 380 VAAVELSHRYIPGRQLPDKAVSLLDTACARVALSQNATPAALEDLRRRIAALELELDALEREAALGADHDERLAELRAEL 459 (852)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999987215545584278999999999999860489568999999999999999998744522733299999999999
Q ss_pred -----------------------------------------------------------------HHCCCCHHHHHHHHH
Q ss_conf -----------------------------------------------------------------211365789998663
Q gi|254780163|r 435 -----------------------------------------------------------------RRKFITEKDIKKTIA 449 (798)
Q Consensus 435 -----------------------------------------------------------------~~~~~~~~~i~~~~~ 449 (798)
T Consensus 460 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~V~~~~ia~vvs 539 (852)
T TIGR03345 460 AALEAELAALEARWQQEKELVEAILALRAELEADADAPADDDAALRAQLAELEAALASAQGEEPLVFPEVDAQAVAEVVA 539 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999999999999999999999999866514334577888999999999974045664435568999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH-
Q ss_conf 1024531011100112334210000246653458999999999877520445657874068861432003889999987-
Q gi|254780163|r 450 SMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLA- 528 (798)
Q Consensus 450 ~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la- 528 (798)
T Consensus 540 ~~t-gIPv~~l~~~e~~~l~~le~~L~~~ViGQ~~Av~~v~~ai~~sraGl~d~~rPigsFLFlGPTGVGKTElAK~LA~ 618 (852)
T TIGR03345 540 DWT-GIPVGRMVRDEIEAVLSLPDRLAERVIGQDHALEAIAERIRTARAGLEDPRKPLGVFLLVGPSGVGKTETALALAE 618 (852)
T ss_pred HHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 996-8987886178888888679999999728499999999999998717999999856899878998778999999999
Q ss_pred --HHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCC
Q ss_conf --304773377206886124653011047800025644431003555158517774044550289999999987775021
Q gi|254780163|r 529 --FALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILT 606 (798)
Q Consensus 529 --~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~lt 606 (798)
T Consensus 619 ~LFg~e~~liR~DMSEy~E~hsvsrLiGaPPGYVGy~eGG~LTe~Vrr~PysVvLfDEIEKAHpdV~nilLQvlD~G~Lt 698 (852)
T TIGR03345 619 LLYGGEQNLITINMSEFQEAHTVSRLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFYQVFDKGVME 698 (852)
T ss_pred HHCCCCCCEEEECCHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHCCCEEE
T ss_conf 97198611478422432104368786389997667487772109888099868886113002889999999872467775
Q ss_pred CCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCC----CCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 77997761254299994242145533036898821----11488999998728878817768289628899999999999
Q gi|254780163|r 607 DQSGKKISFRNVILIMTTNAGALEMSKARIGFGSS----RNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVH 682 (798)
Q Consensus 607 d~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~----~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~ 682 (798)
T Consensus 699 D~~Gr~vdF~NtIIImTSN~Gs~~i~~~~~~~~~~~~~~~~~~~v~~~l~~~F~PEFlnRi-~ii~F~~L~~~~l~~Iv~ 777 (852)
T TIGR03345 699 DGEGREIDFKNTVILLTSNAGSDLIMALCADPETAPDPEALLEALRPELLKVFKPAFLGRM-TVIPYLPLDDDVLAAIVR 777 (852)
T ss_pred CCCCCEEECEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCE-EEEEECCCCHHHHHHHHH
T ss_conf 7999988452129997572447999864037655566899999999999834798886456-689736899999999999
Q ss_pred HHHHHHHHHHHHC-CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
Q ss_conf 9999999999866-9889998899999997189810153267999998623599999962967688848999960
Q gi|254780163|r 683 KFIMKLELQLQEK-GISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGGGVVKVSLN 756 (798)
Q Consensus 683 ~~l~~l~~~l~~~-~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~~~~~g~~~~~v~~~ 756 (798)
T Consensus 778 ~~l~~l~~rL~~~~~i~l~~~~~~~~~l~~~g~~~~~GARpl~r~I~~~i~~~la~~iL~-~~~~g~~~~~i~~~ 851 (852)
T TIGR03345 778 LKLDRIARRLKENHGAELVYSEALVEHIVARCTEVESGARNIDAILNQTLLPELSRQILE-RLAAGEPIERIHLD 851 (852)
T ss_pred HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEEEEEC
T ss_conf 999999999986289689988999999998289977686438999999988999999999-87089972488815