HHsearch alignment for GI: 254780163 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.19 E-value=9.2e-11 Score=96.51 Aligned_cols=140 Identities=29% Similarity=0.390 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHH
Q ss_conf 21789999999986226778748966764116689999999985489883452014455404675306343123789999
Q gi|254780163|r 207 VGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIK 286 (798)
Q Consensus 207 IGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~ 286 (798)
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~ill~GppGtGKT~la~~ia~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (151)
T cd00009 1 VGQEEAIEALREALELPPPKNLLLYGPPGTGKTTLARAIANELF-------RPGAPFLYLNASDLLEGLVVAELFGHFLV 73 (151)
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC-------CCCCCEEEEEHHHCCHHHHHHHHHHHHHH
T ss_conf 98579999999998187998089989999886599999999712-------13798278547770467777576057788
Q ss_pred HHHHH-HCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHCCHHHHHHCEE
Q ss_conf 99987-20389839997361663015544434477788887663----02660388730489999985201114320014
Q gi|254780163|r 287 KIVKE-IESYANAILYIDEIHTLVGAGSASGISVDASNLLKPAL----SSGAVRCIGSTTYSEYRQFFEKDKALVRRFQK 361 (798)
Q Consensus 287 ~~~~~-~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L----~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~ 361 (798)
T Consensus 74 ~~~~~~~~~~~~~vl~iDEi~~l~-~-~~~~---~~~~~l~~~~~~~~~~~~~~vI~~tn~~~~---~~~~~~~~~R~~~ 145 (151)
T cd00009 74 RLLFELAEKAKPGVLFIDEIDSLS-R-GAQN---ALLRVLETLNDLRIDRENVRVIGATNRPLL---GDLDRALYDRLDI 145 (151)
T ss_pred HHHHHHHHHCCCCEEEEECHHHCC-H-HHHH---HHHHHHHHHCCCCCCCCCEEEEEEECCCCC---CCHHHHHHCCCCE
T ss_conf 989999997699869820166559-9-9999---999999871575406788899995289988---6837764255986